DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and ZNF28

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_008900.3 Gene:ZNF28 / 7576 HGNCID:13073 Length:718 Species:Homo sapiens


Alignment Length:370 Identity:94/370 - (25%)
Similarity:146/370 - (39%) Gaps:100/370 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KCRICLVQPKDESLMPTEPDFPDKIKRC-------TGVELSESPDWPNRICTSCALL---LRAAL 65
            ||::|                 ||...|       |.:...|.|    ..|..|..:   |....
Human   328 KCKVC-----------------DKAFTCNSYLAKHTIIHTGEKP----YKCNECGKVFNRLSTLA 371

  Fly    66 KLRSL--------CQQTEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEYEY 122
            :.|.|        |::.||....:...|.:..|...|:..|.|...:..:.|           .|
Human   372 RHRRLHTGEKPYECEECEKVFSRKSHLERHKRIHTGEKPYKCKVCDKAFAYN-----------SY 425

  Fly   123 LDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSLSPKPVTFEDED---------------- 171
            |..:.:.....:...|:....|..:.:..|....::: :.||...|:.|                
Human   426 LAKHSIIHTGEKPYKCNECGKVFNQQSTLARHHRLHT-AEKPYKCEECDKVFRCKSHLERHRRIH 489

  Fly   172 SGQ---------------------------AASFTCNICNNVYSERVKLTNHMKVHSAKKPHECE 209
            :|:                           ...:.||.|..|:|.:..|..|.|:|:|:||::||
Human   490 TGEKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYMCNECGKVFSTKANLACHHKLHTAEKPYKCE 554

  Fly   210 ICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYS 274
            .|.|.|.:...:.||...|||.:||||..||..|...|...:|||:||.|:||||..|.::|..:
Human   555 ECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHQRVHTGEKPYKCNECGKTFRQT 619

  Fly   275 NVLRVHLKTHTGERPFSCQYCQKSFSQL-----HHK-NSHEKSHK 313
            :.|.:|.:.||||:|:.|..|.|:|||:     ||: :|.||.:|
Human   620 SSLIIHRRLHTGEKPYKCNECGKTFSQMSSLVYHHRLHSGEKPYK 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871 9/51 (18%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 201..>258 CDD:227381 25/56 (45%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:463886 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..271 CDD:463886 11/19 (58%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
C2H2 Zn finger 292..312 CDD:275368 11/25 (44%)
ZNF28NP_008900.3 KRAB 7..48 CDD:460171
COG5048 <143..373 CDD:227381 12/65 (18%)
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
SFP1 <264..374 CDD:227516 12/66 (18%)
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368 6/36 (17%)
COG5048 353..714 CDD:227381 86/328 (26%)
C2H2 Zn finger 357..377 CDD:275368 4/19 (21%)
C2H2 Zn finger 385..405 CDD:275368 4/19 (21%)
C2H2 Zn finger 413..433 CDD:275368 4/30 (13%)
C2H2 Zn finger 441..461 CDD:275368 3/19 (16%)
C2H2 Zn finger 469..489 CDD:275368 2/19 (11%)
C2H2 Zn finger 497..517 CDD:275368 0/19 (0%)
C2H2 Zn finger 525..545 CDD:275368 8/19 (42%)
C2H2 Zn finger 553..573 CDD:275368 7/19 (37%)
C2H2 Zn finger 581..601 CDD:275368 8/19 (42%)
C2H2 Zn finger 609..629 CDD:275368 5/19 (26%)
C2H2 Zn finger 637..657 CDD:275368 8/19 (42%)
C2H2 Zn finger 665..685 CDD:275368 94/370 (25%)
C2H2 Zn finger 693..713 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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