DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and 2610008E11Rik

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001004362.2 Gene:2610008E11Rik / 72128 MGIID:1919378 Length:669 Species:Mus musculus


Alignment Length:139 Identity:51/139 - (36%)
Similarity:81/139 - (58%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 FTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSR 242
            :.|..|...:..:..|..|.:.|:.:||:||:.|:|.|.....|.:|..||||.:|:.|..|...
Mouse   471 YECKECRKNFYCKSNLNQHQRTHTGEKPYECKDCNKAFYCKSNLNQHQRTHTGEKPFACKDCSKA 535

  Fly   243 FADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNS 307
            |...|:.:|||:||:.|:||:||.|.::|...:.|..|.:|||||:|:.|:.|.|:|....:.|.
Mouse   536 FYCKSSLVKHQKIHSGEKPYECEECRKTFFQKSDLTRHQRTHTGEKPYECKDCSKTFYCKSNLNQ 600

  Fly   308 HEKSHKRTK 316
            |:::|...|
Mouse   601 HQRTHTHEK 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871
C2H2 Zn finger 180..200 CDD:275368 4/19 (21%)
COG5048 201..>258 CDD:227381 23/56 (41%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..244 CDD:463886 9/22 (41%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 251..271 CDD:463886 11/19 (58%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
2610008E11RikNP_001004362.2 KRAB 10..69 CDD:214630
C2H2 Zn finger 218..237 CDD:275368
C2H2 Zn finger 245..266 CDD:275368
C2H2 Zn finger 274..295 CDD:275368
COG5048 299..644 CDD:227381 51/139 (37%)
C2H2 Zn finger 303..324 CDD:275368
C2H2 Zn finger 332..352 CDD:275368
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 388..408 CDD:275368
C2H2 Zn finger 416..437 CDD:275368
C2H2 Zn finger 445..465 CDD:275368
C2H2 Zn finger 473..493 CDD:275368 4/19 (21%)
C2H2 Zn finger 501..521 CDD:275368 6/19 (32%)
C2H2 Zn finger 529..549 CDD:275368 7/19 (37%)
C2H2 Zn finger 557..577 CDD:275368 6/19 (32%)
C2H2 Zn finger 585..605 CDD:275368 6/19 (32%)
C2H2 Zn finger 613..633 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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