DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zkscan14

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_075811.2 Gene:Zkscan14 / 67235 MGIID:1914485 Length:521 Species:Mus musculus


Alignment Length:359 Identity:88/359 - (24%)
Similarity:142/359 - (39%) Gaps:82/359 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VDSRDLKCRICLVQPKDESLMPTEPD---------FPDKIKRCTGVELSESPDWPNRICTSCALL 60
            :::|.:...:.|   |.|.|...||.         ....:.:|.    ..|.||..::..:..||
Mouse   175 LETRTVNTDVIL---KQEILKEAEPQAWLQEVSQGMVPALTKCG----DPSEDWEEKLPKAAVLL 232

  Fly    61 L--------RAALKLRSLCQQTEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSE 117
            .        |.|:.|.....:.|:|.|..:.:.....::....:|     :..|..|...|.|.:
Mouse   233 QLQGSEEQGRTAIPLLIGVSREERDSKNNESENSGSSVLGQHIQT-----AEGLGTNSQCGDDHK 292

  Fly   118 LEYEYLDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNI 182
            ..:.              |.|.     |::|..|.  :|...|......|:::     ..:.|:.
Mouse   293 QGFH--------------VKCH-----SVKPHSSV--DSAVGLLETQRQFQED-----KPYKCDS 331

  Fly   183 CNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADP- 246
            |...:.:|..|..|.::|:.:||::|:.|.|||.|:..|.:|..||||.:||.|..|...|... 
Mouse   332 CEKGFRQRSDLFKHQRIHTGEKPYQCQECGKRFSQSAALVKHQRTHTGEKPYACPECGECFRQSS 396

  Fly   247 --------------------------STRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHT 285
                                      |:..:|||:|..||||||..|.:||...:.|..|.:|||
Mouse   397 HLSRHQRTHASEKYYKCEECGEIVHVSSLFRHQRLHRGERPYKCGDCEKSFRQRSDLFKHQRTHT 461

  Fly   286 GERPFSCQYCQKSFSQLHHKNSHEKSHKRTKEVK 319
            ||:|::|..|.:.|||......|:::|...|..|
Mouse   462 GEKPYACVVCGRRFSQSATLIKHQRTHTGEKPYK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871 10/53 (19%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 201..>258 CDD:227381 24/83 (29%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
zf-H2C2_2 221..244 CDD:463886 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 7/46 (15%)
zf-H2C2_2 251..271 CDD:463886 11/19 (58%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Zkscan14NP_075811.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
SCAN 40..151 CDD:128708
KRAB 135..193 CDD:214630 5/20 (25%)
COG5048 <303..484 CDD:227381 57/187 (30%)
C2H2 Zn finger 329..349 CDD:275368 5/19 (26%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 3/19 (16%)
C2H2 Zn finger 440..460 CDD:275368 6/19 (32%)
C2H2 Zn finger 468..488 CDD:275368 6/19 (32%)
zf-H2C2_2 481..505 CDD:463886 4/15 (27%)
C2H2 Zn finger 496..516 CDD:275368 88/359 (25%)
Blue background indicates that the domain is not in the aligned region.

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