DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zscan4f

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001103786.2 Gene:Zscan4f / 665902 MGIID:3708485 Length:506 Species:Mus musculus


Alignment Length:321 Identity:72/321 - (22%)
Similarity:115/321 - (35%) Gaps:81/321 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKLRSLCQQTEKDLKEQKLQEINIEIVHDEQ 95
            ||...:|.:....|...|:|:...|:...:           ::..|||..:.:.|          
Mouse   230 FPHGARRASQGTPSHHVDFPSAPTTADVPM-----------EEQPKDLSRENISE---------- 273

  Fly    96 ETKKKTESRDLSKNEATGSDSELEYEYLDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSL 160
               .|....:.|:|.||                .:.|.:::..:..:.:.|...|..||..|..:
Mouse   274 ---DKNNCYNTSRNAAT----------------QVYSGDNIPRNKSDSLFINKRIYHPEPEVGDI 319

  Fly   161 SPKPVTFEDEDSGQAASFTC-----NIC----------------NNVYSERVKLTNHMKVHSAKK 204
             |..|..:...:.|..| ||     ..|                ..:.|:.|.|.   |.|.|..
Mouse   320 -PYGVPQDSTRASQGTS-TCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLG---KNHEANL 379

  Fly   205 P--------------HECEICHKRFRQTPQLARHMNTHTGNR-PYKCDYCDSRFADPSTRIKHQR 254
            |              ::||.|.:.|:....|:.|..||...: ...|..|...|...|.|..|:.
Mouse   380 PCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEI 444

  Fly   255 IHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSHKRT 315
            ||..|:|:||..|.:||.:...|:.|...||||.|:.|..|.:.|.|....:.|.:::.|:
Mouse   445 IHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRS 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871 7/25 (28%)
C2H2 Zn finger 180..200 CDD:275368 6/40 (15%)
COG5048 201..>258 CDD:227381 18/71 (25%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..244 CDD:463886 6/23 (26%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
zf-H2C2_2 251..271 CDD:463886 8/19 (42%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 5/19 (26%)
Zscan4fNP_001103786.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
SCAN <51..117 CDD:153421
zf-C2H2 395..417 CDD:395048 6/21 (29%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
zf-C2H2 452..474 CDD:395048 7/21 (33%)
C2H2 Zn finger 454..474 CDD:275368 6/19 (32%)
zf-H2C2_2 466..491 CDD:463886 10/24 (42%)
C2H2 Zn finger 482..500 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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