DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Platr25

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_054875590.1 Gene:Platr25 / 435366 MGIID:3645613 Length:540 Species:Mus musculus


Alignment Length:260 Identity:82/260 - (31%)
Similarity:130/260 - (50%) Gaps:19/260 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ALKLRSLCQQTEKDLKEQK----LQEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEYEYLD 124
            ||...|..|:.|:..:|:|    :|.:.....|..|..|:....:.|.:.:..|...| ::.:|.
Mouse   161 ALHAHSHAQRHERIHREKKPHGVIQFVEAFAQHSLQLRKRVQTGKKLYEWKQCGKAFE-DHSHLK 224

  Fly   125 SYDVTLESSEDVACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNICNNVYSE 189
            ||:..|...:...|.     ..|.|.|:...   .|.||     ...:|:.. :.|::|...:|:
Mouse   225 SYEGILMGEKPYECH-----QWEKAFSSHSN---LLQPK-----GRHTGEKC-YECDLCGKAFSQ 275

  Fly   190 RVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQR 254
            ..:|..|.::|:.:||::|:.|.|.|.:...|.:|...|||.:||||..||..|:...:..||:|
Mouse   276 HSRLKRHGRIHTGEKPYKCDQCGKAFSEHCNLQKHKRIHTGEKPYKCHQCDKAFSQHHSLQKHKR 340

  Fly   255 IHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSHKRTKEVK 319
            |||.|:||||..|.:.|..|:.|:.|.:.||||:|:.|..|.|:|||.|....|:::|...|..|
Mouse   341 IHTGEKPYKCNECDKVFRQSSDLQKHRRIHTGEKPYKCNQCDKAFSQHHSLQIHKRTHTGEKPYK 405

  Fly   320  319
            Mouse   406  405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 201..>258 CDD:227381 23/56 (41%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..244 CDD:463886 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 251..271 CDD:463886 12/19 (63%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
Platr25XP_054875590.1 KRAB 80..120 CDD:460171
C2H2 Zn finger 210..230 CDD:275368 5/20 (25%)
C2H2 Zn finger 238..258 CDD:275368 7/32 (22%)
COG5048 <239..415 CDD:227381 63/181 (35%)
C2H2 Zn finger 266..286 CDD:275368 5/19 (26%)
C2H2 Zn finger 294..314 CDD:275368 6/19 (32%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
COG5048 <359..534 CDD:227381 19/47 (40%)
C2H2 Zn finger 378..398 CDD:275368 8/19 (42%)
C2H2 Zn finger 406..426 CDD:275368 82/260 (32%)
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 462..482 CDD:275368
C2H2 Zn finger 490..510 CDD:275368
C2H2 Zn finger 518..538 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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