DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and CG4424

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:331 Identity:111/331 - (33%)
Similarity:167/331 - (50%) Gaps:40/331 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRICL----------VQPKDESLMPTEPDFPDKIKRCTGVEL---SESPDWPNRICTSCALLLRA 63
            ||.||          .|..|:.| |......|||:..:|:::   ::....|.|||..|...|..
  Fly    11 CRTCLQDGEAHMVSIFQTADDRL-PGGVSLCDKIESLSGIQIRATAKEEVLPTRICLRCKAFLTL 74

  Fly    64 ALKLRSLCQQTEKDLKEQKL-----QEINIEIVHDEQETKKKT----ESRDLSKNEATGSDSELE 119
            |.|.|.:||::.:.|:|..:     |.:..|:|   |:|:..|    |:..|...|    |..||
  Fly    75 AHKFRQICQRSNEFLREYVIKDAVEQGVVKEVV---QQTRPSTPPPIETEQLEPPE----DEVLE 132

  Fly   120 YEYLDSYDVTLESSEDVA-CSADELVSIE--PAISAPEESVYSLSPKPVTFEDEDSGQAASFTCN 181
            .....:.|...|:....| .....::::|  ||...|..|    :|.|.   ...:.:.....|.
  Fly   133 EGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPAS----TPPPA---PAGAVKGKLHVCA 190

  Fly   182 ICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADP 246
            ||.|.|..:..|..||:.|:.::|:|||||||.|....||.||:..|||.:||.|.||...|||.
  Fly   191 ICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADR 255

  Fly   247 STRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKS 311
            ::.:||:|.|.|||||.|:.|.:.|.|::||::|.||||||:|..||.|.|||:::|:..:|.::
  Fly   256 TSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQT 320

  Fly   312 HKRTKE 317
            .:...:
  Fly   321 QQHIND 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 16/57 (28%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
zf-H2C2_2 193..217 CDD:290200 13/23 (57%)
COG5048 201..>258 CDD:227381 28/56 (50%)
C2H2 Zn finger 208..228 CDD:275368 11/19 (58%)
zf-H2C2_2 221..244 CDD:290200 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 9/19 (47%)
zf-H2C2_2 251..273 CDD:290200 12/21 (57%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
zf-H2C2_2 277..301 CDD:290200 15/23 (65%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 24/81 (30%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
DUF45 <204..281 CDD:302795 38/76 (50%)
COG5048 210..>345 CDD:227381 55/117 (47%)
C2H2 Zn finger 217..237 CDD:275368 11/19 (58%)
C2H2 Zn finger 245..265 CDD:275368 9/19 (47%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 15/23 (65%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471441
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3C1GA
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26482
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.800

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