DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and CG17801

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:364 Identity:91/364 - (25%)
Similarity:137/364 - (37%) Gaps:100/364 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KIKRCTGVELSESPDWPNRICTSCALLLRAALKLRSLCQQTEKDLKEQKLQEINIEIVHDEQETK 98
            |||..||:.|.::...|..||.||...|..::||:.                 .|:.||:|...:
  Fly    33 KIKDLTGIWLEQNERQPRHICPSCLNDLNTSIKLKK-----------------RIQRVHNEATLR 80

  Fly    99 KKT------ESRDLSKNEATGSDSELEYEYLDSYD--------VTLESSEDVACSADE------- 142
            :::      || .:|..|..|..|:||.|  :|||        ...||..|:..:.::       
  Fly    81 RESGLDEDLES-TVSDIEPEGDSSDLESE--ESYDSENYPFDKKAEESDIDLNLAHEDRRNEPHN 142

  Fly   143 ---------LVSIEPAISAPE-------ESVYSLSP------------------------KPVTF 167
                     .....|.|..|.       ..|.:.||                        ||:..
  Fly   143 PYDSETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLAL 207

  Fly   168 EDED------------SGQAASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQ 220
            ..||            :.:..|..|..|..|:.....|..||..|:.:|...|..|.||| .|..
  Fly   208 APEDVAAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFCDKRF-VTKY 271

  Fly   221 LAR-HMNT-HTGNRPYKCDYCDSRFADPSTRIKHQRI-HTNERPYKCEFCSRSFGYSNVLRVHLK 282
            ||| |... |.|.:|::|::|.:.|...:.:..|:|| |..:..|:|:.|::.|.....|..|..
  Fly   272 LARLHERVRHMGEQPFECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKF 336

  Fly   283 THTGERPFSCQYCQKSFSQLHHKNSHEKS---HKRTKEV 318
            .|:|.:||.|..||.:|::.....||..|   .||...:
  Fly   337 LHSGLKPFDCVICQINFARKATLRSHFDSVAHQKRASAI 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 9/22 (41%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
zf-H2C2_2 193..217 CDD:290200 10/23 (43%)
COG5048 201..>258 CDD:227381 21/59 (36%)
C2H2 Zn finger 208..228 CDD:275368 10/21 (48%)
zf-H2C2_2 221..244 CDD:290200 9/24 (38%)
C2H2 Zn finger 236..256 CDD:275368 6/20 (30%)
zf-H2C2_2 251..273 CDD:290200 8/22 (36%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
zf-H2C2_2 277..301 CDD:290200 10/23 (43%)
C2H2 Zn finger 292..312 CDD:275368 7/22 (32%)
CG17801NP_650660.2 zf-AD 9..74 CDD:285071 15/57 (26%)
zf-C2H2 231..252 CDD:278523 6/20 (30%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
zf-H2C2_2 244..269 CDD:290200 10/25 (40%)
C2H2 Zn finger 260..281 CDD:275368 10/21 (48%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 318..338 CDD:275368 5/19 (26%)
C2H2 Zn finger 346..362 CDD:275368 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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