DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and CG6808

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster


Alignment Length:364 Identity:112/364 - (30%)
Similarity:159/364 - (43%) Gaps:77/364 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRICLVQPKDESLMPT-EPDFPDKIKRCTGVELSESPDWPNRICTSCALLLR------AALK--- 66
            ||.|..:....:|... |.:....:....|..:......|::|||.|.:.|.      :|.|   
  Fly    10 CRTCRKKGTQSTLQSLFESNAHKLLISYAGTSVKPDDGLPDQICTVCLMQLEEVDRFLSACKQSD 74

  Fly    67 --LRSLCQQT-----------EKDLKEQK------------LQE--INIEIVHDEQETKKKTE-- 102
              ||||.:||           :||..|||            ::|  ||.:...:..||.|..|  
  Fly    75 AHLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNISGRLIEENPINFKTQENALETTKDDEIL 139

  Fly   103 -------------------SRDLSKNEATGSDSELEYEYLD-SYDVTLESSEDVACSADELVSIE 147
                               .:|:.:.:.|.||.:|:.|..| :|..|.  |::.:.:.|      
  Fly   140 PINKFSSDFVFDLNVNAENEKDIHQEDYTISDMDLDREISDQNYSETY--SQESSAATD------ 196

  Fly   148 PAISAPEESVYSLSPKPVTFEDE--DSGQAA---SFTCNICNNVYSERVKLTNHMKVHSAKKPHE 207
             :|....|..::|.|.    .|.  |.|.|.   .:.|.||:|.|....:|..|.:||..:|.|:
  Fly   197 -SIQETSEDYHNLEPS----ADYVIDLGVACEPDKYRCKICSNTYRCLSQLNAHSQVHRKEKDHQ 256

  Fly   208 CEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFG 272
            ||:|.|.||....|..||.||||.:||:|.||..||||.||..||:|:|||||||.|..|.::|.
  Fly   257 CEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRKHERLHTNERPYACNICGKTFS 321

  Fly   273 YSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKS 311
            .|:....|...|:.|:...|..|:|.|...|...:||||
  Fly   322 LSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 10/45 (22%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
zf-H2C2_2 193..217 CDD:290200 11/23 (48%)
COG5048 201..>258 CDD:227381 30/56 (54%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
zf-H2C2_2 221..244 CDD:290200 13/22 (59%)
C2H2 Zn finger 236..256 CDD:275368 12/19 (63%)
zf-H2C2_2 251..273 CDD:290200 13/21 (62%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
zf-H2C2_2 277..301 CDD:290200 7/23 (30%)
C2H2 Zn finger 292..312 CDD:275368 9/20 (45%)
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 15/68 (22%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
zf-C2H2 255..277 CDD:278523 10/21 (48%)
C2H2 Zn finger 257..277 CDD:275368 9/19 (47%)
zf-H2C2_2 269..293 CDD:290200 13/23 (57%)
C2H2 Zn finger 285..305 CDD:275368 12/19 (63%)
zf-H2C2_2 299..321 CDD:290200 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 5/19 (26%)
C2H2 Zn finger 341..359 CDD:275368 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471442
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3338
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.890

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