DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and CG8159

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster


Alignment Length:339 Identity:92/339 - (27%)
Similarity:156/339 - (46%) Gaps:44/339 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRICLVQPKDESLMPTEPDFPDK----IKRCTGVELSESPDWPNRICTSCALLLRAALKLRSLCQ 72
            ||:|.....:...:........|    |...|||.|...|..|:.:|.:|...|::|:..|..|.
  Fly     6 CRVCASSTDNSKSLKLFNSGACKVLQQINLLTGVLLQCEPGLPDWMCETCQTDLKSAISFRDRCL 70

  Fly    73 QTEKDLKEQKLQEINIEIVHDEQETKKKTESRD-----------LSKNEATGSDSELEYEYLDSY 126
            :::|..:|        .:|.:|::|.:.:..|.           ..|..|:..:..::.|.|.:.
  Fly    71 RSQKIFEE--------SLVRNEEDTFRSSVRRSARSQRQRHEDTAPKTPASPLEVMIKLESLSNG 127

  Fly   127 DVTLESSEDV----ACSADELVSIEPAISAPEESVYSLSP------------KPVTFEDEDSGQA 175
            |   |..:.:    :|:..::.....|:|:..|...:.||            |....|:......
  Fly   128 D---EEDDGIDHLDSCNEADMELAIKAMSSSTEDDGTTSPVRLKRTRRRGLKKGGKGENRTKVTL 189

  Fly   176 ASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCD 240
            ..|.|:.|.|..:.:.....|::.||..:|.:||:|..||..:.:|..|...|||:|.::|.|||
  Fly   190 PVFFCDQCGNNITGKSSFDRHLRKHSGIRPFQCELCPARFLSSGELKGHQVMHTGDRKFQCRYCD 254

  Fly   241 SRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHK 305
            ..:.:.|.|::|:|.|||:||:.|..|.:||..|.:|:.|:..|||||.|.|:.|.:||::..|.
  Fly   255 RTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHTGERLFRCELCHRSFARPTHL 319

  Fly   306 NSHEKS--HKRTKE 317
            .:|.:|  ||...|
  Fly   320 KTHFRSNTHKHNLE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 12/48 (25%)
C2H2 Zn finger 180..200 CDD:275368 4/19 (21%)
zf-H2C2_2 193..217 CDD:290200 9/23 (39%)
COG5048 201..>258 CDD:227381 22/56 (39%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:290200 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..273 CDD:290200 11/21 (52%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 277..301 CDD:290200 12/23 (52%)
C2H2 Zn finger 292..312 CDD:275368 7/21 (33%)
CG8159NP_649823.2 zf-AD 5..78 CDD:214871 18/71 (25%)
C2H2 Zn finger 194..214 CDD:275368 4/19 (21%)
COG5048 <197..322 CDD:227381 48/124 (39%)
zf-H2C2_2 206..231 CDD:290200 9/24 (38%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
zf-H2C2_2 265..287 CDD:290200 11/21 (52%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
zf-H2C2_2 291..315 CDD:290200 12/23 (52%)
C2H2 Zn finger 306..328 CDD:275368 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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