DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zfp26

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001102465.2 Gene:Zfp26 / 367033 RGDID:1565847 Length:956 Species:Rattus norvegicus


Alignment Length:270 Identity:80/270 - (29%)
Similarity:121/270 - (44%) Gaps:29/270 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SLCQQTEKD----LKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDS------------E 117
            |.|....||    |||...:|   .|:...|..|..|.:.|:|:...|...|            |
  Rat   237 SACHLRGKDFLPPLKETSTEE---NILQLNQCVKPLTLTPDVSQRMCTLEKSVECSDCGKTFVNE 298

  Fly   118 LEYEYLDS--YDVTLESSEDVACSADELVSIEPAISAPEESVYSLS--------PKPVTFEDEDS 172
            ||.:...|  .:..|...|:...:....||.:..:...|:..|...        |..:....:..
  Rat   299 LELQAHSSSHSENNLHKPEECGQAFTHPVSHDGHVIPTEKKYYECKKCEKFFTHPVYLNIHVQSH 363

  Fly   173 GQAASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCD 237
            .....:.|..|...::||..|..|::.|:.:|.:||:.|.|.|.|..:|..||.:|||.:||:||
  Rat   364 TVEKPYDCKECGKAFTERSSLIVHLRQHTREKSYECKECGKTFIQPSRLTEHMRSHTGEKPYQCD 428

  Fly   238 YCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQL 302
            .|.:.||..|....|.|.||.|:|::|..|.::|..|:.|..|::|||||:|:.|:.|.|:||..
  Rat   429 QCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGR 493

  Fly   303 HHKNSHEKSH 312
            .....|.:.|
  Rat   494 SWLTIHLRKH 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 201..>258 CDD:227381 24/56 (43%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
zf-H2C2_2 221..244 CDD:463886 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..271 CDD:463886 8/19 (42%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Zfp26NP_001102465.2 KRAB 104..162 CDD:214630
C2H2 Zn finger 288..308 CDD:275368 4/19 (21%)
COG5048 338..751 CDD:227381 55/166 (33%)
C2H2 Zn finger 343..363 CDD:275368 1/19 (5%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..447 CDD:275368 8/19 (42%)
C2H2 Zn finger 455..475 CDD:275368 6/19 (32%)
C2H2 Zn finger 483..503 CDD:275368 6/19 (32%)
C2H2 Zn finger 511..531 CDD:275368
C2H2 Zn finger 539..559 CDD:275368
C2H2 Zn finger 567..587 CDD:275368
COG5048 591..>918 CDD:227381
C2H2 Zn finger 595..615 CDD:275368
C2H2 Zn finger 623..643 CDD:275368
C2H2 Zn finger 651..671 CDD:275368
C2H2 Zn finger 679..699 CDD:275368
C2H2 Zn finger 707..727 CDD:275368
C2H2 Zn finger 735..755 CDD:275368
C2H2 Zn finger 763..783 CDD:275368
C2H2 Zn finger 791..811 CDD:275368
C2H2 Zn finger 819..839 CDD:275368
C2H2 Zn finger 847..867 CDD:275368
C2H2 Zn finger 875..895 CDD:275368
C2H2 Zn finger 903..923 CDD:275368
C2H2 Zn finger 931..947 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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