DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zfp251

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001178840.1 Gene:Zfp251 / 366954 RGDID:1311138 Length:633 Species:Rattus norvegicus


Alignment Length:343 Identity:90/343 - (26%)
Similarity:145/343 - (42%) Gaps:72/343 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PKDESLMPTEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKLRSLCQQTEKDLKEQKL 83
            ||.|.:...|.:....:....|.|..|       :..||.               |:.::|.:|.
  Rat    59 PKPELISQLEQEEELWVLDLLGAEEPE-------VLRSCG---------------TDSEIKSEKE 101

  Fly    84 QEINIEIVHDEQET-----------KKKTESRDLSKNEATGSDSELEYEYLDSYDVTLESSEDVA 137
            :.|..:...:|.:|           .:.:||::...:|:.|..|:..........|   :.:|..
  Rat   102 RSILNQKCSEEVKTPELSQKFPRANSQASESKEACAHESQGDGSQGSSATQGLKGV---AKKDST 163

  Fly   138 CSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNICNNVYSERVKLTNHMKVHSA 202
            ...:.|.....|.||.::.: :.|...||.:...:||.. |.|:|||.::.....|:.|.:.|:.
  Rat   164 VCREHLPENTQASSAFDKHL-NPSQSGVTIQRNKTGQRI-FKCDICNKMFKYNSDLSRHRRSHTG 226

  Fly   203 KKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCD----------------------------YC 239
            :||:||..|.:.|..:..|..|...||||:|:|||                            .|
  Rat   227 EKPYECGPCGRAFTHSSNLILHQRIHTGNKPFKCDECGKTFGLNSYLRLHQRIHTGEKPFGCNEC 291

  Fly   240 DSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQ--- 301
            ...|:..|:.|:|:.|||.|:||||..|.::|..|..|..|.:.||||:|..|.:|.|:||:   
  Rat   292 GKAFSRSSSLIQHRIIHTGEKPYKCNECGKAFSQSPQLTQHQRIHTGEKPHGCSWCGKAFSRNAS 356

  Fly   302 -LHHKNSH--EKSHKRTK 316
             :.|:..|  ||.||.|:
  Rat   357 LIQHQRIHTGEKPHKCTQ 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871 7/37 (19%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 201..>258 CDD:227381 23/84 (27%)
C2H2 Zn finger 208..228 CDD:275368 5/19 (26%)
zf-H2C2_2 221..244 CDD:463886 11/50 (22%)
C2H2 Zn finger 236..256 CDD:275368 7/47 (15%)
zf-H2C2_2 251..271 CDD:463886 10/19 (53%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 9/25 (36%)
Zfp251NP_001178840.1 KRAB 15..75 CDD:214630 4/15 (27%)
COG5048 82..467 CDD:227381 85/320 (27%)
C2H2 Zn finger 204..224 CDD:275368 6/19 (32%)
C2H2 Zn finger 232..252 CDD:275368 5/19 (26%)
C2H2 Zn finger 260..280 CDD:275368 2/19 (11%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 1/3 (33%)
C2H2 Zn finger 400..420 CDD:275368
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
zf-H2C2_2 469..493 CDD:463886
C2H2 Zn finger 484..504 CDD:275368
C2H2 Zn finger 557..577 CDD:275368
C2H2 Zn finger 585..602 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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