DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zfp787

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001102374.1 Gene:Zfp787 / 365176 RGDID:1310536 Length:381 Species:Rattus norvegicus


Alignment Length:194 Identity:68/194 - (35%)
Similarity:95/194 - (48%) Gaps:10/194 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LDSYDVTLESSED----VACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNIC 183
            |||.|..:.|.|:    :....|::.|..|...:|.:|.....|.|      .....|.:.|..|
  Rat    13 LDSEDQQMASHENPVDILIMDDDDVPSWPPNKLSPPQSAPPPGPPP------RPRPPAPYICTEC 71

  Fly   184 NNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPST 248
            ...:|...|||.|.:.|:.::|:.|..|.|.|.|:..|.:|...|||.:||.|..|..||:..|.
  Rat    72 GKSFSHWSKLTRHQRTHTGERPNACTDCGKTFSQSSHLVQHRRIHTGEKPYACSECGKRFSWSSN 136

  Fly   249 RIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSH 312
            .::||||||.|:||.|..|.|||..|..|..|.::|:|.:||.|..|.:.|||......|.:.|
  Rat   137 LMQHQRIHTGEKPYTCPDCGRSFTQSKSLAKHRRSHSGLKPFVCPRCGRGFSQPKSLARHLRLH 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
zf-H2C2_2 193..217 CDD:290200 9/23 (39%)
COG5048 201..>258 CDD:227381 23/56 (41%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:290200 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..273 CDD:290200 14/21 (67%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
zf-H2C2_2 277..301 CDD:290200 9/23 (39%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Zfp787NP_001102374.1 zf-C2H2 66..88 CDD:395048 7/21 (33%)
C2H2 Zn finger 68..88 CDD:275368 7/19 (37%)
COG5048 <93..200 CDD:227381 45/106 (42%)
C2H2 Zn finger 96..116 CDD:275368 7/19 (37%)
C2H2 Zn finger 124..144 CDD:275368 8/19 (42%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
C2H2 Zn finger 282..302 CDD:275368
C2H2 Zn finger 319..339 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I4420
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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