| Sequence 1: | NP_650860.1 | Gene: | CG4854 / 42391 | FlyBaseID: | FBgn0038766 | Length: | 319 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001102321.1 | Gene: | Zscan25 / 363872 | RGDID: | 1308619 | Length: | 543 | Species: | Rattus norvegicus |
| Alignment Length: | 196 | Identity: | 67/196 - (34%) |
|---|---|---|---|
| Similarity: | 93/196 - (47%) | Gaps: | 21/196 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 139 SADELVSIEPAISAPEE-SVYSLSPKPVTFEDEDSGQAAS-----------------FTCNICNN 185
Fly 186 VYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRI 250
Fly 251 KHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKSHKRT 315
Fly 316 K 316 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4854 | NP_650860.1 | zf-AD | 12..>57 | CDD:214871 | |
| C2H2 Zn finger | 180..200 | CDD:275368 | 6/19 (32%) | ||
| COG5048 | 201..>258 | CDD:227381 | 21/56 (38%) | ||
| C2H2 Zn finger | 208..228 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 221..244 | CDD:463886 | 10/22 (45%) | ||
| C2H2 Zn finger | 236..256 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 251..271 | CDD:463886 | 10/19 (53%) | ||
| C2H2 Zn finger | 264..284 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 292..312 | CDD:275368 | 7/19 (37%) | ||
| Zscan25 | NP_001102321.1 | SCAN | 38..120 | CDD:460417 | |
| KRAB_A-box | 230..>258 | CDD:470626 | |||
| COG5048 | <337..531 | CDD:227381 | 62/178 (35%) | ||
| C2H2 Zn finger | 348..368 | CDD:275368 | 2/19 (11%) | ||
| C2H2 Zn finger | 376..396 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 404..424 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 432..452 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 460..479 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 487..507 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 515..534 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||