DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zfp819

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001014039.1 Gene:Zfp819 / 308561 RGDID:1309564 Length:614 Species:Rattus norvegicus


Alignment Length:354 Identity:97/354 - (27%)
Similarity:149/354 - (42%) Gaps:98/354 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VDSRDLKCRICLVQPKDESLMPTEPDFPDKIKRCTGVELSESPDWPNRICT--SCALLL--RAAL 65
            |||    ||:| .|....::..|         ..||          .|.||  .||.:|  |:.|
  Rat   224 VDS----CRLC-TQGLSSAVCTT---------HSTG----------ERACTGNQCANVLSPRSPL 264

  Fly    66 KLRSLCQQTEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEYEYL-----DS 125
            :...:..|.|.           :|...||    |...:...|..:.|.:..:||..::     .|
  Rat   265 RQHGILSQDEP-----------VEYTKDE----KAFTAGSASCEQQTTNTLDLETHFICHICGKS 314

  Fly   126 YDVTLESSEDVACSADELVSIEPAISAPEESVY-------SLSPKPVTFED-------------E 170
            :   |:.||         :|..|..|. ||:.|       ||:..|.:.:.             .
  Rat   315 F---LQKSE---------LSFHPGTSR-EETRYECPDCLKSLTTSPSSLQAHHEAHTKQKPYTCH 366

  Fly   171 DSGQAAS-----------------FTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQT 218
            |.|::.|                 :.|:.|...:|::..||.|.::|:.:||:.|..|.|.|...
  Rat   367 DCGKSFSYASHLKVHLRIHTGERPYVCSDCGKAFSQKSVLTTHQRIHTGEKPYACSHCGKLFVYA 431

  Fly   219 PQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKT 283
            ..|.:|...|||.:||:|..|...|::.|....|:||||.|:||||..|.:||...:.|:||.:|
  Rat   432 SDLRKHSRFHTGEKPYECRDCGKVFSNKSHLPVHRRIHTGEKPYKCRDCGKSFRRKSHLQVHGRT 496

  Fly   284 HTGERPFSCQYCQKSFSQLHHKNSHEKSH 312
            ||||:|::|..|.|:||.....::|::.|
  Rat   497 HTGEKPYACPDCGKAFSHSSVLSTHQRIH 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 10/46 (22%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
zf-H2C2_2 193..217 CDD:290200 10/23 (43%)
COG5048 201..>258 CDD:227381 21/56 (38%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..244 CDD:290200 9/22 (41%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
zf-H2C2_2 251..273 CDD:290200 13/21 (62%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 277..301 CDD:290200 13/23 (57%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Zfp819NP_001014039.1 KRAB 27..81 CDD:214630
C2H2 Zn finger 336..357 CDD:275368 3/20 (15%)
COG5048 <346..538 CDD:227381 57/180 (32%)
C2H2 Zn finger 365..385 CDD:275368 3/19 (16%)
C2H2 Zn finger 393..413 CDD:275368 6/19 (32%)
C2H2 Zn finger 421..441 CDD:275368 6/19 (32%)
C2H2 Zn finger 449..469 CDD:275368 6/19 (32%)
C2H2 Zn finger 477..497 CDD:275368 7/19 (37%)
SFP1 <499..582 CDD:227516 10/27 (37%)
C2H2 Zn finger 505..525 CDD:275368 6/19 (32%)
C2H2 Zn finger 533..553 CDD:275368
C2H2 Zn finger 561..581 CDD:275368
zf-H2C2_2 573..598 CDD:404364
C2H2 Zn finger 589..609 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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