DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and Zfp13

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_063124608.1 Gene:Zfp13 / 287095 RGDID:1304577 Length:550 Species:Rattus norvegicus


Alignment Length:135 Identity:58/135 - (42%)
Similarity:76/135 - (56%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 FTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSR 242
            :.|:.|...::.|..|..|...|:..|||:|.||.|.|.|:..|..|..||||.:||.|..|...
  Rat   388 YVCDRCAKRFTRRSDLVTHQGTHTGAKPHKCPICGKCFTQSSALVTHQRTHTGVKPYPCPECGKC 452

  Fly   243 FADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNS 307
            |:..|..|.|.|.||.|:||.|..|.:||.:|:.|..|.:||.|.||:||..|.||||:..:.:.
  Rat   453 FSQRSNLIAHNRTHTGEKPYHCLDCGKSFSHSSHLTAHQRTHRGVRPYSCPLCGKSFSRRSNLHR 517

  Fly   308 HEKSH 312
            |||.|
  Rat   518 HEKIH 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 201..>258 CDD:227381 25/56 (45%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
zf-H2C2_2 221..244 CDD:463886 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 251..271 CDD:463886 9/19 (47%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
C2H2 Zn finger 292..312 CDD:275368 9/19 (47%)
Zfp13XP_063124608.1 None
Blue background indicates that the domain is not in the aligned region.

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