Protein Alignment CG4854 and Zscan12

DIOPT Version :10

• Sequence 1: NP_650860.1
• Gene: CG4854 / 42391
• FlyBaseID: FBgn0038766
• Length: 319
• Species: Drosophila melanogaster
• Sequence 2: NP_001417286.1
• Gene: Zscan12 / 266716
• RGDID: 628738
• Length: 503
• Species: Rattus norvegicus
• Alignment Length: 274
• Identity: 75/274 - (27%)
• Similarity: 119/274 - (43%)
• Gaps: 52/274 - (18%)

  Fly    65 LKLRSLCQQTEKDLKEQKLQEI-------NI-------EIVHDEQ--------ETKKKTESRDLS 107
            :|.:..|:..:.:.:|:::..|       |:       |.:..||        :|.|..|:|| .
  Rat   166 VKAKPGCELADGEAQEEQVSGIETGNESRNVTLKQGLWEGMEAEQNPSSRLAKDTLKCEETRD-P 229

  Fly   108 KNEATGSDSELEYEYLDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDS 172
            :.|::|...|......:...|.|..:.:.|    ||.:|     .|...|:.
  Rat   230 REESSGISREDSQPLRNENVVNLTENSNHA----ELQNI-----CPGRKVHG------------- 272

  Fly   173 GQAASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCD 237
                   |:.|...:|:..:|..|.::|:..:|:.||.|.|.||....|.||...|||.:||||:
  Rat   273 -------CDECGKTFSQHSRLIEHRRIHTGDRPYRCEECGKTFRWRTVLIRHKVVHTGEKPYKCN 330

  Fly   238 YCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQL 302
            .|...|...|...:|||:|:.|:.|.|..|.::|.....|..|||:|...||:.|..|.|||::.
  Rat   331 ECGRAFGQWSALNQHQRLHSGEKHYHCNECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRR 395

  Fly   303 HHKNSHEKSHKRTK 316
            ...:.|:..|..||
  Rat   396 STLSQHQGVHTGTK 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4854	NP_650860.1	zf-AD	12..>57	CDD:214871
		C2H2 Zn finger	180..200	CDD:275368	5/19 (26%)
		COG5048	201..>258	CDD:227381	24/56 (43%)
		C2H2 Zn finger	208..228	CDD:275368	9/19 (47%)
		zf-H2C2_2	221..244	CDD:463886	11/22 (50%)
		C2H2 Zn finger	236..256	CDD:275368	7/19 (37%)
		zf-H2C2_2	251..271	CDD:463886	8/19 (42%)
		C2H2 Zn finger	264..284	CDD:275368	7/19 (37%)
		C2H2 Zn finger	292..312	CDD:275368	6/19 (32%)
Zscan12	NP_001417286.1	None