DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and klu-1

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_493611.2 Gene:klu-1 / 173366 WormBaseID:WBGene00013970 Length:543 Species:Caenorhabditis elegans


Alignment Length:227 Identity:62/227 - (27%)
Similarity:96/227 - (42%) Gaps:34/227 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 EKDLKEQKL---QEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEYEYLDSYDVTLESSEDV 136
            |::..||:|   ....:||..|.:.|.....|  .::.:.....:...|..|     |..|:|| 
 Worm   240 EREQVEQRLLLRPSSGMEIKKDLETTNSFVSS--WAREQIFAMQNATMYNLL-----TARSAED- 296

  Fly   137 ACSADELVSIEPAISAPEE-SVYSLSPKPVTFEDEDSGQAA---SFTCNICNNVYSERVKLTNHM 197
             ||         .||.|.. .|:..|...:||...|....|   .:.|.:|...::...:|..|:
 Worm   297 -CS---------TISTPGPLKVFPRSKDDMTFAPRDDSSRAKQMQYPCTLCGQAFAVHDRLAKHI 351

  Fly   198 ---------KVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQ 253
                     .:..|.|.|:|.:|.|.|.::..|.|||..|||.:||.|..|:..|:.......|.
 Worm   352 ASRHRQRSCTLDDASKVHKCNMCSKSFSRSDMLTRHMRLHTGAKPYSCPTCNQVFSRSDHLSTHL 416

  Fly   254 RIHTNERPYKCEFCSRSFGYSNVLRVHLKTHT 285
            |.||.|:||.|..|:.|....:::..|::||:
 Worm   417 RTHTGEKPYACPMCNYSASRRDMISRHMRTHS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 4/28 (14%)
zf-H2C2_2 193..217 CDD:290200 9/32 (28%)
COG5048 201..>258 CDD:227381 22/56 (39%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
zf-H2C2_2 221..244 CDD:290200 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
zf-H2C2_2 251..273 CDD:290200 10/21 (48%)
C2H2 Zn finger 264..284 CDD:275368 4/19 (21%)
zf-H2C2_2 277..301 CDD:290200 3/9 (33%)
C2H2 Zn finger 292..312 CDD:275368
klu-1NP_493611.2 C2H2 Zn finger 334..354 CDD:275368 4/19 (21%)
zf-C2H2 369..391 CDD:278523 9/21 (43%)
C2H2 Zn finger 371..391 CDD:275368 8/19 (42%)
zf-H2C2_2 383..408 CDD:290200 12/24 (50%)
COG5048 395..>448 CDD:227381 17/52 (33%)
C2H2 Zn finger 399..419 CDD:275368 5/19 (26%)
zf-H2C2_2 411..436 CDD:290200 10/24 (42%)
C2H2 Zn finger 427..447 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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