DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4854 and ZNF600

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001308795.1 Gene:ZNF600 / 162966 HGNCID:30951 Length:791 Species:Homo sapiens


Alignment Length:146 Identity:60/146 - (41%)
Similarity:84/146 - (57%) Gaps:6/146 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDS 241
            |..||.|..::.:...|..|..:|:.:||::|..|.|.|.|...||||...|||.:||||:.||.
Human   314 SHKCNECGKIFGQNSALVIHKAIHTGEKPYKCNECDKAFNQQSNLARHRRIHTGEKPYKCEECDK 378

  Fly   242 RFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKN 306
            .|:..||...|:||||.|:||||:.|..:|.:::.|..|.:.||||:.:.|..|.|:||   ||:
Human   379 VFSRKSTLESHKRIHTGEKPYKCKVCDTAFTWNSQLARHKRIHTGEKTYKCNECGKTFS---HKS 440

  Fly   307 S---HEKSHKRTKEVK 319
            |   |.:.|...|..|
Human   441 SLVCHHRLHGGEKSYK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 201..>258 CDD:227381 27/56 (48%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
zf-H2C2_2 221..244 CDD:463886 13/22 (59%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..271 CDD:463886 11/19 (58%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
C2H2 Zn finger 292..312 CDD:275368 9/22 (41%)
ZNF600NP_001308795.1 KRAB 24..60 CDD:460171
COG5048 <154..503 CDD:227381 60/146 (41%)
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 261..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368
C2H2 Zn finger 317..337 CDD:275368 5/19 (26%)
COG5048 341..748 CDD:227381 53/119 (45%)
C2H2 Zn finger 345..365 CDD:275368 9/19 (47%)
C2H2 Zn finger 373..393 CDD:275368 8/19 (42%)
C2H2 Zn finger 401..421 CDD:275368 5/19 (26%)
C2H2 Zn finger 429..449 CDD:275368 9/22 (41%)
C2H2 Zn finger 457..477 CDD:275368 60/146 (41%)
C2H2 Zn finger 485..505 CDD:275368
C2H2 Zn finger 513..533 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
C2H2 Zn finger 569..589 CDD:275368
C2H2 Zn finger 597..617 CDD:275368
C2H2 Zn finger 625..645 CDD:275368
C2H2 Zn finger 653..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
C2H2 Zn finger 709..729 CDD:275368
C2H2 Zn finger 737..757 CDD:275368
zf-H2C2_2 749..774 CDD:463886
C2H2 Zn finger 765..785 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.