DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4854 and ZNF211

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001252526.1 Gene:ZNF211 / 10520 HGNCID:13003 Length:629 Species:Homo sapiens


Alignment Length:228 Identity:73/228 - (32%)
Similarity:106/228 - (46%) Gaps:22/228 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 QETKKKTESRDLSKNEATGSDSELEYEYLDSYDV--TLESSE-DVACSADELVSIEPAISAPEES 156
            |..|..:|.|....||....     :.|..|:.:  .:.:.| ..||         |........
Human   339 QHQKVHSEERPYECNECGKF-----FTYYSSFIIHQRVHTGERPYAC---------PECGKSFSQ 389

  Fly   157 VYSLSPKPVTFEDEDSGQAASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQL 221
            :|||:........|     ..:.|..|...:|:|..|..|.:||:.::|:||..|.|.|.|...|
Human   390 IYSLNSHRKVHTGE-----RPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSL 449

  Fly   222 ARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTG 286
            ..|...|||.||::|:.|...|:..|:.|.|:|:||.||||:|..|.:||..|:....|.|.|||
Human   450 IYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTG 514

  Fly   287 ERPFSCQYCQKSFSQLHHKNSHEKSHKRTKEVK 319
            |||:.|..|.||||...:..:|::.|...:.|:
Human   515 ERPYVCGECGKSFSHSSNLKNHQRVHTGERPVE 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
zf-H2C2_2 193..217 CDD:290200 10/23 (43%)
COG5048 201..>258 CDD:227381 22/56 (39%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:290200 9/22 (41%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 251..273 CDD:290200 12/21 (57%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 277..301 CDD:290200 13/23 (57%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
ZNF211NP_001252526.1 KRAB 46..106 CDD:214630
KRAB 46..85 CDD:279668
COG5048 244..615 CDD:227381 73/228 (32%)
C2H2 Zn finger 299..316 CDD:275368
C2H2 Zn finger 324..344 CDD:275368 2/4 (50%)
zf-H2C2_2 336..361 CDD:290200 6/26 (23%)
C2H2 Zn finger 352..372 CDD:275368 4/24 (17%)
zf-H2C2_2 368..389 CDD:290200 4/29 (14%)
C2H2 Zn finger 380..400 CDD:275368 5/28 (18%)
zf-H2C2_2 392..417 CDD:290200 5/29 (17%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
zf-H2C2_2 420..445 CDD:290200 10/24 (42%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
zf-H2C2_2 448..473 CDD:290200 10/24 (42%)
C2H2 Zn finger 464..484 CDD:275368 7/19 (37%)
zf-C2H2 518..540 CDD:278523 7/21 (33%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
zf-H2C2_2 532..557 CDD:290200 3/16 (19%)
C2H2 Zn finger 548..568 CDD:275368 73/228 (32%)
zf-H2C2_2 560..585 CDD:290200
C2H2 Zn finger 576..596 CDD:275368
zf-H2C2_2 588..611 CDD:290200
C2H2 Zn finger 604..624 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.