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Protein Alignment CG4854 and Znf780b

DIOPT Version :10

Sequence 1:	NP_650860.1	Gene:	CG4854 / 42391	FlyBaseID:	FBgn0038766	Length:	319	Species:	Drosophila melanogaster
Sequence 2:	NP_001419672.1	Gene:	Znf780b / 100910046	RGDID:	6500398	Length:	668	Species:	Rattus norvegicus

Alignment Length:	331	Identity:	82/331 - (24%)
Similarity:	132/331 - (39%)	Gaps:	62/331 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 TNVDSRDLKCRICLVQPKDESLMPTEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKL 67
            |:.|.:..||::|      ||....:....:..|..|.|:..:        |..|....|.....
  Rat   354 THTDEKPFKCKLC------ESAFRRKYQLSEHQKIHTNVKPYQ--------CKDCGKFFRRRSNF 404

  Fly    68 ---RSL--------CQQTEKDLKEQKLQEINIEIVHDE--QETKKKTESRDLSKNEATGSDSELE 119
               :|:        |:|..|..:      :||.::..:  ...|:..|..:..|.        ..
  Rat   405 TEHQSIHTGKKPFECKQCGKVFR------LNIHLIRHQSFHSGKRPFECNECGKG--------FH 455

  Fly   120 YEYLDSYDVTLESS----EDVACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTC 180
            :....:|..|:.:.    |...|..    |.:...|..|..|...:.||             :.|
  Rat   456 FSSQLNYHKTIHTGQTPFECEKCGK----SFKRVCSLLEHRVIHAAVKP-------------YEC 503

  Fly   181 NICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFAD 245
            :.|...::.|..|..|.|:||.::|.||:.|.|.|....||.||...|||.:.::|:.|.|.|..
  Rat   504 SECGKTFNRRSNLVQHQKIHSGERPFECKECGKGFTVLAQLTRHQTIHTGEKSFECEQCGSAFRL 568

  Fly   246 PSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEK 310
            .....:|||||.:.:|::|:.|.:.|.....||:|.:.|||||||.|:.|.:.|...:....|.:
  Rat   569 QYQLTQHQRIHNDVKPFECKECGKGFVRGTALRIHERIHTGERPFQCKECGEGFQYHYQFLGHSR 633

  Fly   311 SHKRTK 316
            :|...|
  Rat   634 THTGKK 639

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.