DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and znf577

DIOPT Version :10

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_031748859.1 Gene:znf577 / 100490968 XenbaseID:XB-GENE-6049402 Length:752 Species:Xenopus tropicalis


Alignment Length:139 Identity:55/139 - (39%)
Similarity:77/139 - (55%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 FTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSR 242
            |:|:.|...:|.:.:|..|.::|:.:||..|..|.|.|....||..|..||||.:||.|..|...
 Frog   468 FSCSECGKHFSYKFQLKTHHRIHTGEKPFSCVECGKCFSDQSQLKTHHRTHTGEKPYSCSECGKC 532

  Fly   243 FADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNS 307
            |:..|...||.|.||.|:|:.|..|.:.|...:.|::|.:|||||:||||..|.|.||...|..:
 Frog   533 FSHQSLLKKHNRTHTGEKPFSCSECGKCFSKQSHLKIHYRTHTGEKPFSCSECGKCFSYKSHLKT 597

  Fly   308 HEKSHKRTK 316
            |.::|...|
 Frog   598 HHRTHTGEK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:214871
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 201..>258 CDD:227381 23/56 (41%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:463886 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 251..271 CDD:463886 9/19 (47%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
znf577XP_031748859.1 KRAB_A-box 88..121 CDD:143639
C2H2 Zn finger 294..322 CDD:275368
COG5048 328..734 CDD:227381 55/139 (40%)
C2H2 Zn finger 330..350 CDD:275368
C2H2 Zn finger 358..378 CDD:275368
C2H2 Zn finger 386..406 CDD:275368
C2H2 Zn finger 414..434 CDD:275368
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 470..490 CDD:275368 5/19 (26%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
C2H2 Zn finger 554..574 CDD:275368 5/19 (26%)
C2H2 Zn finger 582..602 CDD:275368 7/19 (37%)
C2H2 Zn finger 610..630 CDD:275368
C2H2 Zn finger 638..658 CDD:275368
C2H2 Zn finger 666..686 CDD:275368
C2H2 Zn finger 694..714 CDD:275368
C2H2 Zn finger 722..742 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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