DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4854 and ZSCAN30

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001106205.1 Gene:ZSCAN30 / 100101467 HGNCID:33517 Length:494 Species:Homo sapiens


Alignment Length:225 Identity:70/225 - (31%)
Similarity:109/225 - (48%) Gaps:34/225 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 TESRDLSKNEATGSDSELEYEYLDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSL----- 160
            ||...|..:|:.||.|      ::|.|:|.:|.:                  ..|.:|..     
Human   268 TEHSVLESHESEGSFS------MNSNDITQQSVD------------------TREKLYECFDCGK 308

  Fly   161 ----SPKPVTFEDEDSGQAASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQL 221
                |.|.:..:...:|: ..:.|..|...:|....|..|.::||.:||:||..|.|.||.:.:|
Human   309 AFCQSSKLIRHQRIHTGE-RPYACKECGKAFSLSSDLVRHQRIHSGEKPYECCECGKAFRGSSEL 372

  Fly   222 ARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTG 286
            .||...|||.:||:|..|...|:..|..|:|::|||.::.|:|..|.::||.|::|..|.:.|||
Human   373 IRHRRIHTGEKPYECGECGKAFSRSSALIQHKKIHTGDKSYECIACGKAFGRSSILIEHQRIHTG 437

  Fly   287 ERPFSCQYCQKSFSQLHHKNSHEKSHKRTK 316
            |:|:.|..|.|||:|......|::.|...|
Human   438 EKPYECNECGKSFNQSSALTQHQRIHTGEK 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
zf-H2C2_2 193..217 CDD:290200 11/23 (48%)
COG5048 201..>258 CDD:227381 25/56 (45%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
zf-H2C2_2 221..244 CDD:290200 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
zf-H2C2_2 251..273 CDD:290200 8/21 (38%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 277..301 CDD:290200 12/23 (52%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
ZSCAN30NP_001106205.1 SCAN 44..154 CDD:128708
SCAN 44..122 CDD:280241
COG5048 281..>360 CDD:227381 21/103 (20%)
zf-C2H2 301..323 CDD:278523 3/21 (14%)
C2H2 Zn finger 303..323 CDD:275368 2/19 (11%)
zf-H2C2_2 316..339 CDD:290200 3/23 (13%)
COG5048 <328..479 CDD:227381 54/140 (39%)
C2H2 Zn finger 331..351 CDD:275368 5/19 (26%)
zf-H2C2_2 343..366 CDD:290200 10/22 (45%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
zf-H2C2_2 371..396 CDD:290200 11/24 (46%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 399..424 CDD:290200 9/24 (38%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-H2C2_2 428..452 CDD:290200 12/23 (52%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..480 CDD:290200 3/13 (23%)
C2H2 Zn finger 471..491 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.