DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and si:dkey-210j14.3

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_001342850.3 Gene:si:dkey-210j14.3 / 100003238 ZFINID:ZDB-GENE-131121-88 Length:350 Species:Danio rerio


Alignment Length:321 Identity:86/321 - (26%)
Similarity:130/321 - (40%) Gaps:78/321 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 ALLLRAALKLRSLCQQTEKDLKEQKLQEINIEIVHDEQETKKKTESR------DLSKNEATGS-- 114
            :||||..:   |.|....:.||::      ...:..|.::.:||.::      ..|:...|||  
Zfish    36 SLLLRLEI---SRCTNENESLKKK------CHFLESELQSARKTAAKMNGTEAPFSRTGLTGSAR 91

  Fly   115 ----DSELEYEYL--------DSYDVTLESSEDVACSADELVSI-------EP-AISAPEESVYS 159
                |:....|:.        .:.....||.:|.:..|::.||:       || .|...||:...
Zfish    92 RPSIDNAFSKEWCMNLWRHEESNAGEQEESHQDSSGMAEDPVSLLDDEEDEEPDMIMIKEETFDD 156

  Fly   160 LSPKPVTFEDEDSGQAA--------SFTC----------------NI-----------------C 183
            .|.|....|||.|..|.        |..|                |:                 .
Zfish   157 CSGKNKPDEDEMSSLAGPAMPSDGRSQNCEDYITYTVPSDEQARPNVQQPQPEEESLHGTISTHG 221

  Fly   184 NNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPST 248
            :|...:....|::....|.:|..||..|.:.|.:...|..||.||:|.:|:.|..|..|||..:.
Zfish   222 HNTAEQNFPSTHNPTSFSEEKRFECVFCQRTFNKLTYLKAHMRTHSGEKPFVCTVCGKRFAQKTY 286

  Fly   249 RIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHE 309
            ...|||.|:.||||.|..|.:||...:.|.|||::||||:|:||..|.||::.....|:|:
Zfish   287 LRIHQRTHSGERPYSCMECGKSFAQKSSLNVHLRSHTGEKPYSCSECGKSYAYKQGFNTHQ 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 4/52 (8%)
zf-H2C2_2 193..217 CDD:290200 7/23 (30%)
COG5048 201..>258 CDD:227381 22/56 (39%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..244 CDD:290200 10/22 (45%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..273 CDD:290200 12/21 (57%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
zf-H2C2_2 277..301 CDD:290200 14/23 (61%)
C2H2 Zn finger 292..312 CDD:275368 6/18 (33%)
si:dkey-210j14.3XP_001342850.3 COG5048 227..>295 CDD:227381 22/67 (33%)
C2H2 Zn finger 246..266 CDD:275368 6/19 (32%)
zf-H2C2_2 258..283 CDD:290200 11/24 (46%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
zf-H2C2_2 286..311 CDD:290200 12/24 (50%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
zf-H2C2_2 314..339 CDD:290200 14/24 (58%)
C2H2 Zn finger 330..347 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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