DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4424 and ZNF142

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001353219.1 Gene:ZNF142 / 7701 HGNCID:12927 Length:1887 Species:Homo sapiens


Alignment Length:351 Identity:94/351 - (26%)
Similarity:135/351 - (38%) Gaps:115/351 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LCDKIESLSG------IQIRATAKEEVLPTRICLRCKAFLTLAHK----FRQICQRSNEFLREYV 93
            ||....||.|      .::...|.:|..|:|:.|.       .|:    |...||..:...||.|
Human  1536 LCPSPASLRGHTRKQHPRLECGACQEAFPSRLALD-------EHRRQQHFSHRCQLCDFAARERV 1593

  Fly    94 IKDAVEQGVVKEVVQQTRPST-------------PPPIE--------TEQLEPPEDEVLEEGV-- 135
                   |:||..::|...::             .||:.        ..||      ||:..|  
Human  1594 -------GLVKHYLEQHEETSAAVAASDGDGDAGQPPLHCPFCDFTCRHQL------VLDHHVKG 1645

  Fly   136 -------------WSTEDPIEETPHG---PAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKG 184
                         :||::..:.|.|.   ..||             ||                 
Human  1646 HGGTRLYKCTDCAYSTKNRQKITWHSRIHTGEK-------------PY----------------- 1680

  Fly   185 KLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEIC-HKSFHVNYQLKRHIRQHTGAKPYTCQYC 248
              | |.:|.......|.|..|||.|.:||.|.|..| :|...|| |||.|:.:|||.|||.|..|
Human  1681 --H-CHLCPYACADPSRLKYHMRIHKEERKYLCPECGYKCKWVN-QLKYHMTKHTGLKPYQCPEC 1741

  Fly   249 Q--RNFADRTSLVKHERT-HRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSF-- 308
            :  .|.||  :|..|:.| ||..|.:.|:.|||.|....:|:.|.:.|:..||::|.:|:::|  
Human  1742 EYCTNRAD--ALRVHQETRHREARAFMCEQCGKAFKTRFLLRTHLRKHSEAKPYVCNVCHRAFRW 1804

  Fly   309 --ARIHNLVAHLQTQQHINDPRLTAY 332
              ...|:.:.|  |.:|....||..|
Human  1805 AAGLRHHALTH--TDRHPFFCRLCNY 1828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 15/62 (24%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 37/80 (46%)
COG5048 210..>345 CDD:227381 49/131 (37%)
C2H2 Zn finger 217..237 CDD:275368 9/20 (45%)
C2H2 Zn finger 245..265 CDD:275368 8/22 (36%)
zf-H2C2_2 257..282 CDD:290200 11/25 (44%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 8/27 (30%)
C2H2 Zn finger 301..320 CDD:275368 5/22 (23%)
ZNF142NP_001353219.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
C2H2 Zn finger 421..438 CDD:275368
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 545..566 CDD:275368
C2H2 Zn finger 574..595 CDD:275368
zf-H2C2_5 601..625 CDD:404746
C2H2 Zn finger 603..623 CDD:275368
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 687..707 CDD:275368
C2H2 Zn finger 714..731 CDD:275368
PHA03247 928..>1219 CDD:223021
C2H2 Zn finger 1306..1353 CDD:275368
C2H2 Zn finger 1373..1394 CDD:275368
C2H2 Zn finger 1402..1422 CDD:275368
C2H2 Zn finger 1430..1451 CDD:275368
C2H2 Zn finger 1626..1646 CDD:275368 5/25 (20%)
C2H2 Zn finger 1654..1674 CDD:275368 4/19 (21%)
C2H2 Zn finger 1682..1702 CDD:275368 7/19 (37%)
C2H2 Zn finger 1710..1730 CDD:275368 9/20 (45%)
zf-H2C2_2 1723..1747 CDD:404364 11/23 (48%)
C2H2 Zn finger 1738..1759 CDD:275368 8/22 (36%)
C2H2 Zn finger 1767..1787 CDD:275368 7/19 (37%)
C2H2 Zn finger 1795..1815 CDD:275368 4/19 (21%)
C2H2 Zn finger 1823..1843 CDD:275368 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.