DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and Zscan4f

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001103786.2 Gene:Zscan4f / 665902 MGIID:3708485 Length:506 Species:Mus musculus


Alignment Length:262 Identity:63/262 - (24%)
Similarity:100/262 - (38%) Gaps:51/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PSTPPPIETEQLEPPED---EVLEEG----------------------------------VWSTE 139
            ||.|...:....|.|:|   |.:.|.                                  ::..|
Mouse   249 PSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPE 313

  Fly   140 DPIEETPHG-PAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGK----LHVCAICGNGYPRK 199
            ..:.:.|:| |.:..|.:..|...|........|...|.....::.:    :....:.|..:...
Mouse   314 PEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEAN 378

  Fly   200 STLDTHMRRH-NDERPYECEICHKSFHVNYQLKRHIRQHTGAK-PYTCQYCQRNF---ADRTSLV 259
            ...::|.:|. .|.:.|:||.|.:.|.....|..|.|.|...| ...|..||:.|   :||.:  
Mouse   379 LPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRT-- 441

  Fly   260 KHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHI 324
             ||..|..|:|:.|.||.|.|::.:.||.|...||||.|::|.||::.|.:......||: ..|.
Mouse   442 -HEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLR-NYHR 504

  Fly   325 ND 326
            :|
Mouse   505 SD 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 2/19 (11%)
DUF45 <204..281 CDD:302795 28/81 (35%)
COG5048 210..>345 CDD:227381 43/121 (36%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 8/22 (36%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
Zscan4fNP_001103786.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
SCAN <51..117 CDD:295388
zf-C2H2 395..417 CDD:278523 8/21 (38%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..446 CDD:275368 8/22 (36%)
zf-H2C2_2 438..463 CDD:290200 12/27 (44%)
C2H2 Zn finger 454..474 CDD:275368 8/19 (42%)
zf-H2C2_2 466..491 CDD:290200 12/24 (50%)
C2H2 Zn finger 482..500 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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