DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG18764

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster


Alignment Length:425 Identity:100/425 - (23%)
Similarity:154/425 - (36%) Gaps:138/425 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MMTLCRTCLQDGEAHMV------SIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRIC 65
            |...||||     ..::      ::|...::::...::|      ::|..:.   .:..||:.||
  Fly     1 MALQCRTC-----GSIIYNKMPKNLFHIENEKMLQDINL------VTGTTLH---NDPELPSSIC 51

  Fly    66 LRCKAFLTLAHKFRQIC----------QRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPPP--- 117
            ..|...|..|..||:.|          :||.|               .||..:.......||   
  Fly    52 ACCTLDLNQAILFRERCILTQKQLVHRRRSPE---------------AKEPAEDVEEMASPPDCL 101

  Fly   118 ------IETEQLEPPEDEVLE------------------EGVWSTEDPIE---------ETPHGP 149
                  ::...:|.|| |||:                  |.|.:.:|..|         |:....
  Fly   102 NDPFGEVDEYIVESPE-EVLDHDSDAHHDLDEDNYIDSVEDVDALQDMAEVAEEDSQDVESLISS 165

  Fly   150 AEKE-------------------------RPTVLTVEMLPAPYPP-------------PASTPPP 176
            .:||                         ..|:...|:...|..|             ||:|.|.
  Fly   166 VQKELESICNDDSNSDNNDYMEPQNGSYFNETINEYEVSSNPNTPLPESKSAAGRSTKPATTKPK 230

  Fly   177 APAGAVKGKLH-----------------VCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSF 224
            .....|..|..                 ||..||..:..:|....||.||...:.:.|:.|.|.|
  Fly   231 RKKQYVTWKNMTEEQIIERKRLQRKRECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRF 295

  Fly   225 HVNYQLKRHIR-QHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKM 288
            :.::.:..|.| .|.|.|||.|::|.::|.:..:.:.|||||.|.:||:|..|.|.|..||..|.
  Fly   296 YTDHLMTLHQRIIHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKR 360

  Fly   289 HYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQH 323
            |...|||.:...|.:|.:||.|..:|.|||:::.|
  Fly   361 HELIHTGVRAFACTICKQSFQRNTHLKAHLRSKFH 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 20/97 (21%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 29/77 (38%)
COG5048 210..>345 CDD:227381 43/115 (37%)
C2H2 Zn finger 217..237 CDD:275368 6/20 (30%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..320 CDD:275368 9/18 (50%)
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 17/84 (20%)
C2H2 Zn finger 260..280 CDD:275368 6/19 (32%)
zf-H2C2_2 272..297 CDD:290200 8/24 (33%)
C2H2 Zn finger 288..309 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
C2H2 Zn finger 345..365 CDD:275368 8/19 (42%)
C2H2 Zn finger 373..391 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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