DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and zgc:101130

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001037792.1 Gene:zgc:101130 / 445160 ZFINID:ZDB-GENE-040801-72 Length:372 Species:Danio rerio


Alignment Length:220 Identity:82/220 - (37%)
Similarity:110/220 - (50%) Gaps:39/220 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 DPIEETPHGPAE-------KERPTVLTVEMLPAPYPP---------PASTPPPAPAGAVKGKLHV 188
            ||.|:.    ||       ||.||.|..|......||         |::..|.    |.|.|.:|
Zfish     2 DPYEDF----AEQRDLMEVKEEPTKLNEEEEEEEEPPSIYYITEENPSTLSPT----ATKLKNYV 58

  Fly   189 CAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFA 253
            |:||...:.||..||.|:|.|..|:|:.|..|.|||....:|.||.:.|||.|||||..|.::.|
Zfish    59 CSICEKSFARKYRLDRHVRTHTGEKPFACVECAKSFACKEKLARHAKIHTGEKPYTCSLCGKSLA 123

  Fly   254 DRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHL 318
            .:|.|.:|..||..|:|:.|..|||.||..:.|:.|.|.||||:||||:.|.|.|.|...|::|:
Zfish   124 CKTRLKRHMNTHTGEKPHVCLQCGKCFTCNASLQRHVKLHTGERPHICRECGKGFIRNEKLISHM 188

  Fly   319 ---------------QTQQHINDPR 328
                           ::.:|:|..|
Zfish   189 TIHTGERPFICDECGKSFRHVNGLR 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
DUF45 <204..281 CDD:302795 34/76 (45%)
COG5048 210..>345 CDD:227381 53/134 (40%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 14/23 (61%)
C2H2 Zn finger 301..320 CDD:275368 7/33 (21%)
zgc:101130NP_001037792.1 COG5048 43..>334 CDD:227381 69/175 (39%)
C2H2 Zn finger 59..79 CDD:275368 9/19 (47%)
zf-H2C2_2 72..96 CDD:290200 12/23 (52%)
C2H2 Zn finger 87..107 CDD:275368 8/19 (42%)
C2H2 Zn finger 115..135 CDD:275368 6/19 (32%)
zf-H2C2_2 128..152 CDD:290200 11/23 (48%)
C2H2 Zn finger 143..163 CDD:275368 9/19 (47%)
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)
C2H2 Zn finger 199..219 CDD:275368 3/15 (20%)
C2H2 Zn finger 227..247 CDD:275368
zf-H2C2_2 239..264 CDD:290200
C2H2 Zn finger 255..275 CDD:275368
C2H2 Zn finger 283..303 CDD:275368
zf-H2C2_2 296..320 CDD:290200
C2H2 Zn finger 311..331 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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