DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and Sry-delta

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:356 Identity:81/356 - (22%)
Similarity:119/356 - (33%) Gaps:92/356 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 HMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICLRCKAFLT---------LAH 76
            |:.:..||..|..||                          .|:|.||...|:         :..
  Fly    43 HLANCIQTQLDLKPG--------------------------ARLCPRCFQELSDYDTIMVNLMTT 81

  Fly    77 KFRQICQRSNEFLREYVIKDAVEQGVVKEV-VQQTRPSTPPPIETEQL--------EPPEDEVLE 132
            :.|...|.......|:.:.::.|..:|:|| :.|:...|....|.:.|        |..:.|:..
  Fly    82 QKRLTTQLKGALKSEFEVPESGEDILVEEVEIPQSDVETDADAEADALFVELVKDQEESDTEIKR 146

  Fly   133 EGVWSTEDP---------IEETPHGPAE---------KERPTVLTVEMLPAPYPPPASTPPPAPA 179
            |.|...|:.         .|:...|.:|         ::|||...|:.       ..:|     .
  Fly   147 EFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQ-------ECTT-----C 199

  Fly   180 GAV----------------KGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNY 228
            |.|                |...|:|.|||.....:..|:.||..|..:...:|..|.|||....
  Fly   200 GKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPV 264

  Fly   229 QLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHR-NERPYACKTCGKKFTYASVLKMHYKT 292
            ...||:|.|...|.|.|:.|...|:....|..|...|. .|.|..|..|...|........|...
  Fly   265 NTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLI 329

  Fly   293 HTGEKP-HICQLCNKSFARIHNLVAHLQTQQ 322
            |...:| |.|.:|.|||...:.|..|::|.:
  Fly   330 HKENRPRHYCSVCPKSFTERYTLKMHMKTHE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 13/79 (16%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 24/77 (31%)
COG5048 210..>345 CDD:227381 34/115 (30%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 5/19 (26%)
zf-H2C2_2 257..282 CDD:290200 8/25 (32%)
C2H2 Zn finger 273..293 CDD:275368 4/19 (21%)
zf-H2C2_2 286..310 CDD:290200 9/24 (38%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 44/154 (29%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
C2H2 Zn finger 310..327 CDD:275370 3/16 (19%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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