DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG4360

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length:263 Identity:65/263 - (24%)
Similarity:98/263 - (37%) Gaps:99/263 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 TPHGPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRH 209
            ||..|.::|..:|::.|.:....|               .|...|.:|.|.:.:.:||..||:.|
  Fly   115 TPISPMKQEVQSVISEEEVVVDDP---------------RKKKQCHVCKNKFRQLTTLRNHMKIH 164

  Fly   210 NDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLV--------------- 259
            .|||||:|:.|.|:|.....|..|::.|||.||:||..|.::|..:::|:               
  Fly   165 TDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPT 229

  Fly   260 ----------------------------------------------------------------- 259
                                                                             
  Fly   230 SLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQL 294

  Fly   260 ----KHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQT 320
                .|||||.:.:||.|:||.|.|:..:.|..|.|.|||:||:.|..|:..|.:...|..||:|
  Fly   295 STLHNHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKT 359

  Fly   321 QQH 323
            ..|
  Fly   360 HTH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 35/160 (22%)
COG5048 210..>345 CDD:227381 49/198 (25%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 7/103 (7%)
zf-H2C2_2 257..282 CDD:290200 13/108 (12%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 11/23 (48%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
zf-H2C2_2 157..181 CDD:290200 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
zf-H2C2_2 185..209 CDD:290200 11/23 (48%)
C2H2 Zn finger 200..220 CDD:275368 4/19 (21%)
C2H2 Zn finger 284..304 CDD:275368 3/19 (16%)
zf-C2H2_8 287..363 CDD:292531 28/76 (37%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368
zf-H2C2_2 491..515 CDD:290200
C2H2 Zn finger 506..526 CDD:275368
zf-H2C2_2 519..543 CDD:290200
C2H2 Zn finger 534..554 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471447
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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