DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4424 and CG7987

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:163 Identity:53/163 - (32%)
Similarity:80/163 - (49%) Gaps:17/163 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 KGKLHVCAICGNGYPRKSTLDTHMRRHNDERP---YECEICHKSFHVNYQLKRHIRQHTGAKPYT 244
            :.|..||.:|...:|...||..|...|:...|   :.|..|.|:|......:.|:|.|||.:||.
  Fly   583 RDKSVVCEVCQEEFPDGRTLSNHRHSHSTTTPGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYG 647

  Fly   245 CQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTH-----TGEKPHICQLC 304
            |:||.:.|||..:|.||||.|..|:||||..|.:.|....||:.|.::|     .....:.|.:|
  Fly   648 CRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVARNTYHCTVC 712

  Fly   305 NKSFARIHNLVAHL---------QTQQHINDPR 328
            ::..|..::|:.||         :.:|.:..||
  Fly   713 SEDLASSNDLIQHLIQHSDSNTAKQRQPVTGPR 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 32/79 (41%)
COG5048 210..>345 CDD:227381 44/136 (32%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 11/19 (58%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 5/28 (18%)
C2H2 Zn finger 301..320 CDD:275368 6/27 (22%)
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381 50/150 (33%)
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 424..444 CDD:275368
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..523 CDD:275368
C2H2 Zn finger 534..554 CDD:275370
C2H2 Zn finger 562..582 CDD:275370
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
C2H2 Zn finger 620..640 CDD:275368 6/19 (32%)
C2H2 Zn finger 648..668 CDD:275368 11/19 (58%)
zf-H2C2_2 661..685 CDD:290200 13/23 (57%)
C2H2 Zn finger 676..696 CDD:275368 6/19 (32%)
C2H2 Zn finger 709..726 CDD:275371 4/16 (25%)
Hph 921..>1017 CDD:290417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.