DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG5245

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:235 Identity:68/235 - (28%)
Similarity:103/235 - (43%) Gaps:36/235 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 EPPEDEVLEEG-VWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGKLH 187
            |||:::..||. ::.:....||     .|.|    :.:|.. ..|.....     |...|..||.
  Fly    14 EPPQEDTFEEELIFISNSDFEE-----LESE----IKIENF-CSYGKDLE-----PVKGVPSKLK 63

  Fly   188 V-------------------CAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRH 233
            .                   |..|...:.||..|::|:|.|.:|||:||..|.|||......|||
  Fly    64 TCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRH 128

  Fly   234 IRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKP 298
            :.:|. .:|:.|.:|.:.|...:||.:|...|..|||:.|..|...|...|.|::|.:||:.|:|
  Fly   129 LLKHE-KRPHKCSHCSKTFTQNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERP 192

  Fly   299 HICQLCNKSFARIHNLVAHLQTQQHINDPRLTAYLSTFKV 338
            ..|..|.|:|....:|..||:|.|.....:.:....:||:
  Fly   193 FECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKL 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 29/76 (38%)
COG5048 210..>345 CDD:227381 45/129 (35%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 10/23 (43%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 53/160 (33%)
C2H2 Zn finger 84..104 CDD:275368 7/19 (37%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 6/19 (32%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
zf-H2C2_2 179..204 CDD:290200 10/24 (42%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 223..243 CDD:275368 2/10 (20%)
C2H2 Zn finger 250..270 CDD:275368
C2H2 Zn finger 278..298 CDD:275368
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471458
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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