DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4424 and CG3281

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:434 Identity:103/434 - (23%)
Similarity:169/434 - (38%) Gaps:119/434 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EIRLNMMT-LCRTCLQDGEAHMVSIFQTADDRLPGG---VSLCDKIESLSGIQIRATAKEEVLPT 62
            ||.:|:.: .||.||   |.|..:::  ..|.:...   :.|...:|::|  :::.|..:..||.
  Fly     5 EIHVNISSQTCRVCL---ETHETNLY--VHDEIKYNDLKLELWQLLEAVS--KLKWTWTDPNLPM 62

  Fly    63 RICLRCKAFLTLAHKFRQICQRSNEFLREYV---------------IKDAVEQGVVKEVVQQTRP 112
            .:|..|...|..|::|....:.::|.|:...               :.:.::|..|..:.|....
  Fly    63 HLCQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAAKPDEVHVDVVELIDQDDVVSMAQYLST 127

  Fly   113 S-TPPPIETEQLEPPED------EVLEEGVWSTEDPIEETPHGPAEKERPT-------------- 156
            | ....:|.|:....:|      :|.||.::::||..:|.......|.||.              
  Fly   128 SFAEQHVEMEEKYGDQDCSAFTSDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLG 192

  Fly   157 -----------------------------------------------------VLTVEMLP---- 164
                                                                 :||.|..|    
  Fly   193 SRLNHSANFIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEHCPRTFK 257

  Fly   165 ----------APYPPPASTPPPAPA--GAVK--GKLHVCAICGNGYPRKSTLDTHMRRHNDERPY 215
                      |.:|...:..|....  .|.|  .|...|..||..:| .|:|..|:|||..:.||
  Fly   258 RQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCGLSFP-VSSLTIHIRRHTGDNPY 321

  Fly   216 ECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKF 280
            :|:.|.|:|..:..|..|:|||||.:|..|:.|.:.|..:..|.:|.|.|..:|||:||.|.|.|
  Fly   322 KCDQCEKAFPRSQDLSLHMRQHTGERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSF 386

  Fly   281 TYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHI 324
            ..::.||:|.:.||||:|:.|.:|.:||....:|..|...:.|:
  Fly   387 VQSNDLKIHMRRHTGERPYQCGVCGESFVCGSHLNIHRNRKGHL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 20/84 (24%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
DUF45 <204..281 CDD:302795 32/76 (42%)
COG5048 210..>345 CDD:227381 44/115 (38%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
CG3281NP_650132.1 zf-AD 14..92 CDD:285071 20/84 (24%)
C2H2 Zn finger 205..226 CDD:275368 0/20 (0%)
C2H2 Zn finger 249..266 CDD:275368 2/16 (13%)
COG5048 <294..>391 CDD:227381 39/97 (40%)
C2H2 Zn finger 296..315 CDD:275368 8/19 (42%)
zf-H2C2_2 307..330 CDD:290200 10/22 (45%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
zf-H2C2_2 335..358 CDD:290200 10/22 (45%)
C2H2 Zn finger 351..371 CDD:275368 6/19 (32%)
zf-H2C2_2 364..388 CDD:290200 12/23 (52%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:290200 12/24 (50%)
C2H2 Zn finger 407..424 CDD:275368 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.