DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG6689

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:467 Identity:106/467 - (22%)
Similarity:166/467 - (35%) Gaps:146/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EIRLNMMTLCRTCLQDGEAHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICL 66
            |.:|..:..||||..|..|.    |:..|...|....|...||.:||:.|.....|   |..:|.
  Fly   158 EEKLEELQKCRTCYNDFTAD----FRAKDLFDPANSVLLFHIEVISGVWISHKPDE---PRLMCP 215

  Fly    67 RCKAFLTLAHKFRQIC-------QRSNEFLREYVIKDAVEQGVVK--EVVQQTRPSTPPPIETEQ 122
            .||:.|..|..||::|       .::.....|..|:...|..:..  :::..|..:....||...
  Fly   216 ACKSALDQAIDFREMCISTELKLSQAKPSTDEVQIEAENENPISSDHDLISDTENTNVEEIEDAG 280

  Fly   123 LEPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTV-----LTVEMLPAPYP----------PPAS 172
            .:..|||...:. .::::.::|....||.::..:|     :..|:|. .|.          .|.:
  Fly   281 GDHVEDEATSDD-QTSQEAVDEVAESPAAQDPLSVALGAKIFKELLD-QYTGKEKARLRKGAPIA 343

  Fly   173 TPPPA---PAGAVKGKL------------------------HVCAICGNGYPRKSTLDTHMRRHN 210
            :.|.|   .||..|.|.                        .||..||..:.....|..||.||.
  Fly   344 SKPKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHT 408

  Fly   211 DERPYECEICHKSFH-------------------------------------------------- 225
            ..:.|:|..|.|:|:                                                  
  Fly   409 RTKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIV 473

  Fly   226 --------------VNYQLKR-------------HIRQHTGAKPYTCQYCQRNFADRTSLVKHER 263
                          |.||.|.             ||:.||.|..|.||.|.::::|...|.:||.
  Fly   474 KRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEM 538

  Fly   264 THRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPR 328
            || .:||..|..|.|.|...:.|:.|...||||:|:.|::||.:|...:|:.:|..::.|.::.|
  Fly   539 TH-EKRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQDNAR 602

  Fly   329 LTAYLSTFKVGI 340
                    |:|:
  Fly   603 --------KLGV 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 25/88 (28%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 33/153 (22%)
COG5048 210..>345 CDD:227381 47/208 (23%)
C2H2 Zn finger 217..237 CDD:275368 10/96 (10%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 11/23 (48%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871 25/79 (32%)
zf-C2H2 385..407 CDD:278523 7/21 (33%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 399..422 CDD:290200 9/22 (41%)
C2H2 Zn finger 415..436 CDD:275368 4/20 (20%)
C2H2 Zn finger 444..460 CDD:275368 0/15 (0%)
C2H2 Zn finger 492..512 CDD:275368 3/19 (16%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 6/19 (32%)
zf-met 574..597 CDD:289631 6/22 (27%)
C2H2 Zn finger 575..591 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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