DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG4820

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster


Alignment Length:383 Identity:91/383 - (23%)
Similarity:145/383 - (37%) Gaps:95/383 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MMTLCRTCLQDGEAHMVSIFQTADDRL----PGGVSLCDKIESLSGIQIRATAKEEVLPTRICLR 67
            |...||||   |:.      ..||:.|    |.|..|...:.|::...::   ..:.||..||..
  Fly     1 MKEFCRTC---GKT------VVADECLQIFTPAGRKLLQCVRSITNCWLQ---NVQDLPNHICTD 53

  Fly    68 CKAFLTLAHKFRQICQRSNE-FLREYVIKDAVEQGVVKEVVQQTRPSTPPPIETEQLEPPEDEVL 131
            |:..|:...|||:.|.:..: |.|.....:..|.....|.::..:.:.|.|:..::|....|..:
  Fly    54 CQVLLSQVQKFRRRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPLGIDELMSASDIKI 118

  Fly   132 EEGVWSTEDPI----EETPHGP-AEKERPTVLTV------EMLPAP-------YPPPASTPPPAP 178
            |        ||    ||.|..| .|.:....|:.      ::||.|       .....:|..||.
  Fly   119 E--------PIQLQMEEDPQAPYPENQLEQALSYGNAPGEDILPLPEDYGEAQTEVATTTNEPAQ 175

  Fly   179 -----AGAVKGKLH---------------------------------VCAICGNGYPRKSTLDTH 205
                 ...:|.|.|                                 :|..||..:...|.|..|
  Fly   176 RRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVH 240

  Fly   206 MRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERP 270
            :.||...:|:||:.||:..:..:.|:||..:||.. ||.|.:|...::..:|.|:|||.      
  Fly   241 LLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTEG-PYACTFCGLEYSTNSSRVRHERE------ 298

  Fly   271 YACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPR 328
             |||......:...::|      .||:...|::|:..|.|..|...|:.:..||.:.|
  Fly   299 -ACKKGRAPQSKWEIIK------KGERTFHCEVCDLWFLRAGNFTQHINSSSHIENER 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 24/86 (28%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 25/76 (33%)
COG5048 210..>345 CDD:227381 34/119 (29%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 8/24 (33%)
C2H2 Zn finger 273..293 CDD:275368 3/19 (16%)
zf-H2C2_2 286..310 CDD:290200 6/23 (26%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
CG4820NP_001097748.1 zf-AD 4..75 CDD:285071 22/82 (27%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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