DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG8478

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster


Alignment Length:207 Identity:46/207 - (22%)
Similarity:71/207 - (34%) Gaps:62/207 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 ASTPPPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHN------------DERPY-------E 216
            ||.|......::..|:..|..|...:..||.||.|||.|:            :..|.       .
  Fly   361 ASKPAKTSTKSIPEKVFSCKNCSTTFRVKSLLDVHMRMHDPVDNGANTLKRLNSNPVAAGVSKNR 425

  Fly   217 CEICHKSFHVNYQLKRHIRQHTGAKPYT----CQYCQRNFADR--------TSLVKHERT----- 264
            |:.|.|:|.:...|..|:.|:....|.:    .::.:.|...:        ||.:.|..|     
  Fly   426 CKFCDKNFALERALHIHLMQNCDKIPPSEKRKLEFTELNHEKKAQLPKIGGTSGINHPMTMPQKP 490

  Fly   265 ---------------HRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARI--- 311
                           .::..|.:.|...|...:|.|    |:|.|...|  |.:|.:||..|   
  Fly   491 QQRISTIPKLAPSQGTQSMAPPSVKKIPKNVAHAGV----YRTPTKTVP--CHICKQSFRSILEF 549

  Fly   312 --HNLVAHLQTQ 321
              |:|..|...|
  Fly   550 TNHSLTVHGNNQ 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
DUF45 <204..281 CDD:302795 21/127 (17%)
COG5048 210..>345 CDD:227381 32/168 (19%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 5/47 (11%)
zf-H2C2_2 257..282 CDD:290200 6/44 (14%)
C2H2 Zn finger 273..293 CDD:275368 5/19 (26%)
zf-H2C2_2 286..310 CDD:290200 8/23 (35%)
C2H2 Zn finger 301..320 CDD:275368 8/23 (35%)
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:278523 9/21 (43%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..444 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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