DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4424 and Zif

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:390 Identity:107/390 - (27%)
Similarity:154/390 - (39%) Gaps:94/390 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEIRLNMMTLCRTCLQDGEAHMVSIFQTADD-RLPGGVSLCDKIESLSGIQIRATAKEEVLPTRI 64
            |.:.|...| ||.||...|.     .|..|: |..|..|..:.:..|.|:........|.:|..|
  Fly     1 MRVELTPQT-CRVCLAQSER-----LQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGI 59

  Fly    65 CLRCKAFLTLAHKFRQICQRS----NEFLREYVIKDAVEQGVVKE-------------VVQQTRP 112
            |..||..|.:|::||:...|.    .|:.||..:.|..:..::||             ::::|..
  Fly    60 CKSCKVELNMAYQFREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQQCDEEMYILEETTT 124

  Fly   113 STPPPIETEQLEPPEDEVLE------------------------------EGVWSTEDPIEETP- 146
            ..    |..|.|...:|.||                              |.|..:|...|||| 
  Fly   125 GE----EEHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPS 185

  Fly   147 ----------------HGPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGKLHVCAICGNG 195
                            .|...:...::.|.:                  |..||. ::|.:|||.
  Fly   186 QQLALQEAAKASLKARRGRVRRGLNSLTTSD------------------GTEKGG-YICDVCGNF 231

  Fly   196 YPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVK 260
            |.::..:..|.|||:....|.||:|...|.|..||::|:..|||:|||.|.:|.|.|...:.|..
  Fly   232 YEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKS 296

  Fly   261 HERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHIN 325
            ||..||..:||.||.|.|.|.||..|..|...|:..|.:.|..|||.|..:|::..|.:|:.|.|
  Fly   297 HENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLHQN 361

  Fly   326  325
              Fly   362  361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 25/86 (29%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 34/76 (45%)
COG5048 210..>345 CDD:227381 47/116 (41%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 24/83 (29%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
COG5048 <250..369 CDD:227381 47/112 (42%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
zf-H2C2_2 266..288 CDD:290200 11/21 (52%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 294..318 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..353 CDD:275368 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3C1GA
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.860

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