DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG17568

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:367 Identity:84/367 - (22%)
Similarity:130/367 - (35%) Gaps:120/367 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ICQRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPPPIETE---QLEPPEDEVLEEG-------- 134
            :.|:..|.|:::.:.:...|    |:....|.:|...|:|:   ::|.|:.|.::.|        
  Fly   133 VYQKPAELLKDFPLAETSSQ----EMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNT 193

  Fly   135 -VWSTEDPIEETPH------------GPAEKERPTVLTVEMLPA-----PYPP----------PA 171
             ....||.::|.|.            .||..|..  :..|||.:     .:.|          .|
  Fly   194 SQLDMEDVLDELPQEELSQPRLDSTTSPASMEND--VKSEMLDSCEGDDDFLPVDGQLMDLVAVA 256

  Fly   172 STP----PPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRR------------------------ 208
            :||    ..|...|.:|::. |..||..|..:::.:.|:.|                        
  Fly   257 TTPNTLESTAEEKAKRGRMD-CEKCGKVYRNRASYEKHLERECRRIERRVKVDKTTTTCDICNKT 320

  Fly   209 --------------HNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLV 259
                          |.:.:||.|:.|.|.......|..|...||.::|:.|..|:..|.:|..|.
  Fly   321 LSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESRPFECTVCKAGFKNRARLK 385

  Fly   260 KH--------------------ERT-------HRNERPYACKTCGKKFTYASVLKMHYKTHTGEK 297
            .|                    .||       |..||...|..||..|..:..||.|..:|||.:
  Fly   386 AHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLLSHTGLR 450

  Fly   298 PHICQLCNKSFA-----RIHNLVAHLQTQQHINDPRLTAYLS 334
            |::|..|.||||     |.|.|..|.|..|..:..||.:.|:
  Fly   451 PYVCNYCGKSFACNANCRSHKLKKHPQEVQQEDGARLPSRLN 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 3/10 (30%)
C2H2 Zn finger 189..209 CDD:275368 6/57 (11%)
DUF45 <204..281 CDD:302795 27/141 (19%)
COG5048 210..>345 CDD:227381 47/157 (30%)
C2H2 Zn finger 217..237 CDD:275368 5/19 (26%)
C2H2 Zn finger 245..265 CDD:275368 8/46 (17%)
zf-H2C2_2 257..282 CDD:290200 11/51 (22%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 13/28 (46%)
C2H2 Zn finger 301..320 CDD:275368 10/23 (43%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871
COG5048 <313..471 CDD:227381 40/157 (25%)
C2H2 Zn finger 314..335 CDD:275368 0/20 (0%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
C2H2 Zn finger 398..418 CDD:275368 2/19 (11%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
zf-H2C2_2 439..463 CDD:290200 12/23 (52%)
C2H2 Zn finger 454..475 CDD:275368 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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