DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and wor

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:284 Identity:79/284 - (27%)
Similarity:113/284 - (39%) Gaps:63/284 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 CQRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPPPIETEQLEPPEDEVLEE---GVWSTEDPIE 143
            ||:.|:....|.       |:||.  ||          |...|..|.:::..   |..:..|..|
  Fly   270 CQQCNKCYATYA-------GLVKH--QQ----------THAYESTEYKIIRSQPGGSGAIVDQTE 315

  Fly   144 E-TPHGPAEKERPTVLTVEMLPAPYPPPA----------ST-----------PPPAPAGAVKGKL 186
            . |....|..:...|.:.:.:..|...|.          ||           .|.|....|| |:
  Fly   316 FCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVK-KV 379

  Fly   187 HVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRN 251
            ..|..|...|.....|..|:|.|.  .|.:|.||.|:|...:.|:.|||.|||.||::||:|.|.
  Fly   380 FSCKNCDKTYVSLGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRA 442

  Fly   252 FADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQL--------CNKSF 308
            ||||::|..|.:||.:.:.|:|.||.|.|:..|:|..|.::.       ||.        ....|
  Fly   443 FADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSG-------CQTEQSGGPSGSGGGF 500

  Fly   309 ARIHNLVAHLQTQQHINDPRLTAY 332
            .: ..|..|||..:..::|....|
  Fly   501 DQ-QQLQQHLQVYEEGHNPHQLYY 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 3/9 (33%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 35/76 (46%)
COG5048 210..>345 CDD:227381 45/131 (34%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 5/31 (16%)
C2H2 Zn finger 301..320 CDD:275368 6/26 (23%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 9/38 (24%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:278523 2/21 (10%)
C2H2 Zn finger 347..367 CDD:275368 2/19 (11%)
PHA00732 379..>417 CDD:177300 13/39 (33%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2_8 405..482 CDD:292531 36/76 (47%)
zf-C2H2 406..428 CDD:278523 9/21 (43%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-H2C2_2 421..444 CDD:290200 13/22 (59%)
zf-C2H2 434..456 CDD:278523 10/21 (48%)
C2H2 Zn finger 436..456 CDD:275368 10/19 (53%)
zf-H2C2_2 448..473 CDD:290200 10/24 (42%)
C2H2 Zn finger 464..481 CDD:275368 7/16 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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