DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and CG4496

DIOPT Version :10

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster


Alignment Length:296 Identity:69/296 - (23%)
Similarity:111/296 - (37%) Gaps:76/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PTRICLRCKAFLTLAHKFRQI--CQRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPPPIETEQL 123
            |..||:.|.....|.....:.  |:..|     .::|...|     |:.::|...     .::::
  Fly   299 PQFICMICHLGAPLEQDSTRCADCESKN-----LMVKPQPE-----ELGEKTTEE-----HSDEM 348

  Fly   124 EPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPP---PASTPPPAPAGAVKGK 185
            |..:||:.|..:.:.:.|...|        :|:::...:.|...||   |:.|.|..|.      
  Fly   349 EGDDDEIEEAALENEKQPQVAT--------QPSLMVTLIPPIQSPPEKVPSHTQPSRPP------ 399

  Fly   186 LHVCAICGNGYPRK-STLDTHMRRHND-----------ERPYECEICHKSFHVNYQLKRHIRQHT 238
                      .||. |:.::.....||           .|.|.|.:||:.|...:.||||...||
  Fly   400 ----------LPRSCSSANSSSSLSNDGNIAGKSMSRTRRSYPCPLCHRPFGTRHNLKRHYMIHT 454

  Fly   239 GAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKF----TYASVLKMHYKTHTGEKPH 299
            |.||::|..|::.|.:.::|.||..||..:|.|.|..|..||    .|:.....|....:..|..
  Fly   455 GEKPFSCSKCRKPFRECSTLKKHMVTHVRDRWYKCLRCPSKFRDYLEYSDHKNNHQDQLSSRKSS 519

  Fly   300 I----------------CQLCNKSFARIHNLVAHLQ 319
            |                |..|.:.|..:....|||:
  Fly   520 IYESDDDGDSSVEDCLECCECQQRFTELDAYTAHLK 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 7/32 (22%)
C2H2 Zn finger 189..209 CDD:275368 3/20 (15%)
COG5048 210..>345 CDD:227381 41/141 (29%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 6/23 (26%)
C2H2 Zn finger 301..320 CDD:275368 6/19 (32%)
CG4496NP_609101.1 SFP1 <208..298 CDD:227516
zf-C2H2 245..267 CDD:395048
C2H2 Zn finger 247..267 CDD:275368
zf-H2C2_2 259..282 CDD:463886
C2H2 Zn finger 275..295 CDD:275368
zf-C2H2 431..453 CDD:395048 9/21 (43%)
C2H2 Zn finger 433..453 CDD:275368 8/19 (42%)
zf-H2C2_2 445..466 CDD:463886 11/20 (55%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 489..510 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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