DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4424 and Paris

DIOPT Version :10

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:317 Identity:90/317 - (28%)
Similarity:140/317 - (44%) Gaps:61/317 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MMTLCRTCLQDGEAHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICLRCKAF 71
            |..:||.|: |....:|:||   |.|....||:.:.|...:|.:::   :.::....||.:|...
  Fly     1 MAEICRVCM-DISGKLVNIF---DARRRTRVSIAEMIAQCTGFEVK---RGDLFSEMICPQCYED 58

  Fly    72 LTLAHKFRQICQRSNEF---LREYVIKDAVEQGVVKEVVQQTRPSTPPPIETEQLEPPEDEVLEE 133
            :..|:..||.|:.|::|   :|:..|:||:                ...:|.|..|..|||....
  Fly    59 VKSAYGIRQTCEESHQFYCRVRDEGIEDAL----------------CALLEEEDWEISEDEDARI 107

  Fly   134 GVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAVKGKLHVCAICGNGYPR 198
            ...|..|     ..|.::.::   :..|                           |..|...|.|
  Fly   108 DSASAAD-----DDGKSDSKK---VAFE---------------------------CRECHKKYQR 137

  Fly   199 KSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHER 263
            |.|...|||.|.|.:.:.|..|.::|.:...||.|::.|..||||.|.:|.:.||.:::|..|||
  Fly   138 KGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHER 202

  Fly   264 THRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQT 320
            ||..|||:.|..|.|.|..:|.|:.|.:||..|:|..|..|.|:|.|..:|..|.::
  Fly   203 THTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFRS 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 23/84 (27%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
COG5048 210..>345 CDD:227381 43/111 (39%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
ParisNP_608840.1 zf-AD 4..78 CDD:462262 22/80 (28%)
C2H2 Zn finger 128..148 CDD:275368 9/19 (47%)
C2H2 Zn finger 156..176 CDD:275368 6/19 (32%)
COG5048 <180..341 CDD:227381 34/80 (43%)
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
C2H2 Zn finger 212..232 CDD:275368 7/19 (37%)
C2H2 Zn finger 240..260 CDD:275368 7/20 (35%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.