DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and mynn

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_005162831.1 Gene:mynn / 327167 ZFINID:ZDB-GENE-030131-5378 Length:823 Species:Danio rerio


Alignment Length:245 Identity:76/245 - (31%)
Similarity:106/245 - (43%) Gaps:71/245 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 ETEQLEPPEDEVLEEGV-WSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTPPPAPAGAV 182
            :.|:.|..:||...:.. |:.|:.::..    .:|.||                           
Zfish   437 DEEEEEEMDDEFENDNEDWAGEEEVKPV----QDKHRP--------------------------- 470

  Fly   183 KGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQY 247
                 :|.||||.:...|:|..|||.|...:||:|.:|.:||....|||.|:|.|||.||:||..
Zfish   471 -----ICNICGNLFSEMSSLRRHMRIHKGLKPYQCTLCTRSFRQGNQLKTHMRIHTGEKPFTCTS 530

  Fly   248 CQRNFADRTSLVK-----------------------------HERTHRNERPYACKTCGKKFTYA 283
            |...||.:..||.                             |.|.|..|:||.|..|||:||.|
Zfish   531 CDSRFAQKCQLVYHCRMHHGEEKPYKCEFCGAAFATSSNLKIHIRKHSGEKPYECGECGKRFTQA 595

  Fly   284 SVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPRLTAYL 333
            |.|..|.:.||||||:||..|..:||...:|:||  .::|..   :|.|:
Zfish   596 STLMYHKRRHTGEKPYICDTCGMAFAVSSSLIAH--NRKHTG---VTPYI 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 10/19 (53%)
DUF45 <204..281 CDD:302795 37/105 (35%)
COG5048 210..>345 CDD:227381 56/153 (37%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 8/48 (17%)
zf-H2C2_2 257..282 CDD:290200 13/53 (25%)
C2H2 Zn finger 273..293 CDD:275368 10/19 (53%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
mynnXP_005162831.1 BTB 14..114 CDD:279045
BTB 25..113 CDD:197585
C2H2 Zn finger 472..492 CDD:275368 10/19 (53%)
zf-H2C2_2 484..509 CDD:290200 11/24 (46%)
C2H2 Zn finger 500..520 CDD:275368 9/19 (47%)
zf-H2C2_2 513..537 CDD:290200 13/23 (57%)
C2H2 Zn finger 528..548 CDD:275368 6/19 (32%)
zf-H2C2_2 541..566 CDD:290200 2/24 (8%)
zf-C2H2 555..577 CDD:278523 2/21 (10%)
C2H2 Zn finger 557..577 CDD:275368 2/19 (11%)
zf-H2C2_2 569..594 CDD:290200 11/24 (46%)
C2H2 Zn finger 585..605 CDD:275368 10/19 (53%)
zf-H2C2_2 598..621 CDD:290200 11/22 (50%)
C2H2 Zn finger 613..633 CDD:275368 7/21 (33%)
C2H2 Zn finger 641..661 CDD:275368 76/245 (31%)
C2H2 Zn finger 669..685 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4177
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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