DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and klf-3

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001022205.1 Gene:klf-3 / 191713 WormBaseID:WBGene00003480 Length:315 Species:Caenorhabditis elegans


Alignment Length:259 Identity:66/259 - (25%)
Similarity:99/259 - (38%) Gaps:69/259 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VKEVVQQTRPSTPPPIET--EQLEPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPA 165
            |::|...:.|..||..||  |...||........|.:|.|      ..|......|.::...|.:
 Worm    89 VQQVPSYSPPHAPPSYETYPEVYYPPHIICNPYDVPTTSD------RNPPYYTEVTTVSAVTLHS 147

  Fly   166 PYPP--PASTPPPAPAG----------AVKGKLHVCAICGNG-------------------YPRK 199
            ..||  ...|||.:|..          |:|.::.:..:..||                   ..||
 Worm   148 MTPPTHKIETPPSSPENSFGPLASQLPAIKMEIPMHPLPHNGELDSTRSSPSSTTSSERSPLQRK 212

  Fly   200 STLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQY--CQRNFADRTSLVKHE 262
            |.::::.|...|          |.|.|                :.|.|  |.:.::..:.|..||
 Worm   213 SRIESNKRNPTD----------KKFVV----------------HACTYPGCFKKYSKSSHLKAHE 251

  Fly   263 RTHRNERPYACK--TCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHI 324
            |||..|:|:.||  .|..||..:..|..|.:.|||:||..|.||:::|||..:|..|::....|
 Worm   252 RTHSGEKPFVCKWQNCSWKFARSDELTRHMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHSTI 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 6/38 (16%)
DUF45 <204..281 CDD:302795 20/80 (25%)
COG5048 210..>345 CDD:227381 36/119 (30%)
C2H2 Zn finger 217..237 CDD:275368 3/19 (16%)
C2H2 Zn finger 245..265 CDD:275368 7/21 (33%)
zf-H2C2_2 257..282 CDD:290200 13/26 (50%)
C2H2 Zn finger 273..293 CDD:275368 7/21 (33%)
zf-H2C2_2 286..310 CDD:290200 11/23 (48%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)
klf-3NP_001022205.1 C2H2 Zn finger 235..254 CDD:275368 5/18 (28%)
C2H2 Zn finger 262..284 CDD:275368 7/21 (33%)
zf-H2C2_2 276..301 CDD:290200 11/24 (46%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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