DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and LOC108184006

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_017211284.1 Gene:LOC108184006 / 108184006 -ID:- Length:359 Species:Danio rerio


Alignment Length:265 Identity:86/265 - (32%)
Similarity:113/265 - (42%) Gaps:54/265 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 IETEQLEPPED-EVLEEGVWSTED--PIEETPH--GPAEKERPTVLTVEMLPAPYPPPASTPPPA 177
            :|:|.|:..|. .|.:|.:....|  .::|..|  ...|::...:||.|       .|..|...:
Zfish     6 VESEDLKIEETFTVKQEDLQEQTDLMVLKEETHQWNEMEEKHQDILTDE-------KPTLTKKTS 63

  Fly   178 PAG--------------------AVKGKLHV------------CAICGNGYPRKSTLDTHMRRHN 210
            ..|                    :.|.||.|            |..||..:.....|..|||.|.
Zfish    64 SRGRPRKSKSKCNFSSKQRRKTFSQKPKLDVHMRVHTGEKPCTCKQCGKSFYTIGNLTVHMRIHT 128

  Fly   211 DERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKT 275
            .|:||.||.|.|||......|.|||.|||.:|||||.|.::|....:|:.|.|.|..||||:|..
Zfish   129 GEKPYTCEQCGKSFFQKENFKTHIRIHTGERPYTCQQCGKSFYHAGNLIMHMRIHTEERPYSCPQ 193

  Fly   276 CGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPRLT--------AY 332
            |||.|.....|::|.:||||||...|..|.|||.:..||..|::.  |..:...|        .|
Zfish   194 CGKSFKQNGNLEVHMRTHTGEKRFTCTQCGKSFVKKQNLDIHMRI--HTGEKPYTCTECGKSFTY 256

  Fly   333 LSTFK 337
            .||.|
Zfish   257 KSTLK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 39/76 (51%)
COG5048 210..>345 CDD:227381 58/136 (43%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)
LOC108184006XP_017211284.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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