DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and znf1034

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_017211154.1 Gene:znf1034 / 103910745 ZFINID:ZDB-GENE-120703-37 Length:512 Species:Danio rerio


Alignment Length:146 Identity:58/146 - (39%)
Similarity:82/146 - (56%) Gaps:2/146 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 KLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQ 249
            |...|..||..:...:.|:.|||.|..|:|:.|..|.|||..:..|.:|:|.|||.||:||..|.
Zfish   231 KPFTCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSYLNQHMRIHTGEKPFTCSQCG 295

  Fly   250 RNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNL 314
            ::|:....|.:|.|.|..|:|:.|..|||.|:.:|.|.:|.:.||||||..|..|.|||::..||
Zfish   296 KSFSQSPYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLYLHMRIHTGEKPFTCTQCGKSFSKSSNL 360

  Fly   315 VAHLQTQQHINDPRLT 330
            ..|:  :.|..:...|
Zfish   361 NIHM--RNHTGEKPFT 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 33/76 (43%)
COG5048 210..>345 CDD:227381 49/121 (40%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)
znf1034XP_017211154.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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