DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and znf1178

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_021325086.1 Gene:znf1178 / 103909503 ZFINID:ZDB-GENE-050208-466 Length:322 Species:Danio rerio


Alignment Length:263 Identity:84/263 - (31%)
Similarity:103/263 - (39%) Gaps:57/263 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 STPPPIETEQLEPPE---DEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTP 174
            |.|.|...:|.|..|   ..|.||....:||  ||..|...|....|......|           
Zfish     2 SDPEPCRIKQEETEELIDVMVKEESEELSED--EEKHHVKTETISHTKTEQSFL----------- 53

  Fly   175 PPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSF--------------- 224
              ....|..|  .:|..||..|.||..|..|||.|..|:|::|..|..||               
Zfish    54 --MERAAENG--FICTQCGKSYSRKCALKLHMRIHTGEKPFKCSHCDMSFFCSGYLKTHEMTHTG 114

  Fly   225 --------------HVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKT 275
                          |.| .||.|:|.|||.||:.|.:|:|.|::...|..|...|..|:|:.|..
Zfish   115 ERPFVCAQCGKSYSHKN-NLKLHMRIHTGEKPFKCSHCERRFSNAGHLKHHRMIHTGEKPFTCAQ 178

  Fly   276 CGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPRLTA-----YLST 335
            |||.||..|.|..|.:.|||...|:|.:|.|:|.|..||..|..|  |..:...|.     ..|.
Zfish   179 CGKSFTRQSCLAQHQQIHTGVSKHVCLMCQKTFIRAGNLRQHQMT--HTGEKPYTCSHCDKSFSQ 241

  Fly   336 FKV 338
            |||
Zfish   242 FKV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 10/19 (53%)
DUF45 <204..281 CDD:302795 34/105 (32%)
COG5048 210..>345 CDD:227381 54/163 (33%)
C2H2 Zn finger 217..237 CDD:275368 10/48 (21%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 10/23 (43%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)
znf1178XP_021325086.1 C2H2 Zn finger 64..84 CDD:275368 10/19 (53%)
COG5048 <88..276 CDD:227381 53/160 (33%)
C2H2 Zn finger 92..112 CDD:275368 4/19 (21%)
C2H2 Zn finger 120..140 CDD:275368 6/20 (30%)
C2H2 Zn finger 148..168 CDD:275368 6/19 (32%)
C2H2 Zn finger 176..196 CDD:275368 9/19 (47%)
C2H2 Zn finger 204..224 CDD:275368 9/21 (43%)
C2H2 Zn finger 232..252 CDD:275368 4/13 (31%)
C2H2 Zn finger 260..280 CDD:275368
C2H2 Zn finger 288..308 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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