DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and LOC103691238

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_008758162.1 Gene:LOC103691238 / 103691238 RGDID:9074604 Length:337 Species:Rattus norvegicus


Alignment Length:285 Identity:87/285 - (30%)
Similarity:116/285 - (40%) Gaps:71/285 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 KEVVQQTRPSTPPPIETEQLEPPEDEVL-------------EEGVWSTEDPIEETPHGPAEKERP 155
            :|.|...||....|   || ..||:::|             ||....|.||  ..|  .|.|.|.
  Rat    36 REAVLHERPLLARP---EQ-PAPEEKLLDGQYLSRSGSGPQEEAFAKTSDP--AVP--KAFKCRN 92

  Fly   156 TVLTVEML------------PAPYPPP--------------------ASTPPPAP---------A 179
            ..|.|..|            ..||..|                    ...|.|.|         :
  Rat    93 CGLAVASLSDLIHHQSSHGCDRPYSCPECDKSFRRGSDLVKHYRVHTGEKPYPCPECGRCFSLSS 157

  Fly   180 GAVKGKL-------HVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQH 237
            ...|.:.       |.|..||..:.|.:.|..|.|.|..|:||.|..|.|:|.|:..|.:|.|.|
  Rat   158 NLTKHRRSHSGLRPHKCMECGEAFGRSADLAKHQRVHTGEKPYACAECGKTFRVSSNLIQHQRTH 222

  Fly   238 TGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQ 302
            ||.|||.|..|.::|:..::|::|:|.|..|:||.|..||..|..:|.|..|.::||||||:.|.
  Rat   223 TGEKPYRCGLCGKSFSLSSNLLQHQRCHTGEKPYFCAWCGDSFGRSSYLLEHQRSHTGEKPYNCC 287

  Fly   303 LCNKSFARIHNLVAHLQTQQHINDP 327
            .|.|:|....|.:.|.:|  |..:|
  Rat   288 ECGKNFTNSSNCLRHQRT--HNGEP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 33/76 (43%)
COG5048 210..>345 CDD:227381 49/118 (42%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)
LOC103691238XP_008758162.1 C2H2 Zn finger 90..110 CDD:275368 4/19 (21%)
COG5048 <111..270 CDD:227381 47/158 (30%)
C2H2 Zn finger 118..138 CDD:275368 1/19 (5%)
C2H2 Zn finger 146..166 CDD:275368 2/19 (11%)
C2H2 Zn finger 174..194 CDD:275368 7/19 (37%)
C2H2 Zn finger 202..222 CDD:275368 8/19 (42%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
COG5048 254..>314 CDD:227381 24/59 (41%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 286..306 CDD:275368 7/21 (33%)
C2H2 Zn finger 314..334 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I4420
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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