DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and znf1008

DIOPT Version :10

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_005171144.1 Gene:znf1008 / 101886637 ZFINID:ZDB-GENE-131121-84 Length:390 Species:Danio rerio


Alignment Length:225 Identity:77/225 - (34%)
Similarity:105/225 - (46%) Gaps:30/225 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 QTRPSTPPPIE--TEQLEPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPA 171
            :|...|....|  .||::..::||.||...::|   |::..|..             .||.....
Zfish     6 ETHTMTDEDTEGLAEQMKVEDEEVNEEKSSTSE---EKSSSGSE-------------TAPPKGSF 54

  Fly   172 STPPPAPAGAVKGKLHV------------CAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSF 224
            |.|....:...||.|.|            |..|...:..|.:|..|.|.|..|||:.|..|.|||
Zfish    55 SCPQCGKSFTRKGHLEVHMVIHTGERPYTCPQCAKSFTCKGSLKDHFRIHTGERPFTCPQCEKSF 119

  Fly   225 HVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMH 289
            ..:..||||:|.|||.:|:||:.|.::|.....|.:|.|.|..:|||.|..|||.:....||:.|
Zfish   120 TNSGGLKRHLRIHTGERPFTCRQCAKSFPSSGELKRHMRIHSRDRPYTCPQCGKSYKQKEVLREH 184

  Fly   290 YKTHTGEKPHICQLCNKSFARIHNLVAHLQ 319
            .|||:||||..|.||.|||.:...|..|::
Zfish   185 TKTHSGEKPFTCTLCGKSFTQQSTLKVHMK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:462262
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
COG5048 210..>345 CDD:227381 50/110 (45%)
C2H2 Zn finger 217..237 CDD:275368 10/19 (53%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..320 CDD:275368 8/19 (42%)
znf1008XP_005171144.1 C2H2 Zn finger 56..76 CDD:275368 5/19 (26%)
COG5048 80..>383 CDD:227381 57/135 (42%)
C2H2 Zn finger 84..104 CDD:275368 6/19 (32%)
C2H2 Zn finger 112..132 CDD:275368 10/19 (53%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
C2H2 Zn finger 168..188 CDD:275368 8/19 (42%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 280..300 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 364..382 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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