DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and LOC100488006

DIOPT Version :10

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 XenbaseID:XB-GENE-29079027 Length:383 Species:Xenopus tropicalis


Alignment Length:147 Identity:65/147 - (44%)
Similarity:81/147 - (55%) Gaps:5/147 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 CAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFA 253
            |.:||..:.||.:|..|.|.|..||||.|..|.|.|..:..|..|.|.|||.:||.|..|.::|.
 Frog   152 CGMCGKCFARKCSLVIHERIHTGERPYPCPDCGKRFTSSATLTTHKRIHTGERPYICWECGKSFT 216

  Fly   254 DRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHL 318
            ..:||..|.|||..|:||.||.|||.|:.:|.|..|.:|||||||:.|..|.|||.....|:.|.
 Frog   217 SNSSLFLHNRTHTGEKPYECKQCGKTFSCSSALVTHTRTHTGEKPYTCAECGKSFFDNSRLLKHQ 281

  Fly   319 QTQQHINDPRLTAYLST 335
            .|  |..:   .||:.|
 Frog   282 AT--HTGE---WAYMCT 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:462262
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
COG5048 210..>345 CDD:227381 56/126 (44%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368
zf-H2C2_2 136..161 CDD:463886 3/8 (38%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
COG5048 <177..327 CDD:227381 54/122 (44%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 9/19 (47%)
C2H2 Zn finger 264..284 CDD:275368 8/21 (38%)
C2H2 Zn finger 292..312 CDD:275368 1/2 (50%)
C2H2 Zn finger 320..340 CDD:275368
zf-H2C2_2 332..357 CDD:463886
C2H2 Zn finger 348..368 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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