DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and LOC100332787

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_002660733.3 Gene:LOC100332787 / 100332787 -ID:- Length:356 Species:Danio rerio


Alignment Length:241 Identity:79/241 - (32%)
Similarity:112/241 - (46%) Gaps:38/241 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 EQGVVKEVVQQTRPSTPPPIETEQLEPPED--EVLEEGVWSTEDPIEETPHGPAEKERPTVLTVE 161
            |...|:.|:.......|..|..:....|.|  |:.||    |:: .:|.||        |:||  
Zfish    39 EMDFVRVVIGDVSDPQPFRILKDDHNEPRDRVEIKEE----TQE-ADEAPH--------TLLT-- 88

  Fly   162 MLPAPYPPPASTPPPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHV 226
                         |..|....|..| :|:.||..:.:|..|:.||..|..::||.|..|.|||..
Zfish    89 -------------PETPKRTEKASL-ICSHCGKSFKQKGHLEDHMNTHTGDKPYACVQCGKSFTH 139

  Fly   227 NYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYK 291
            ...||.|.|.|:|.:.:.||.|.:.|..:.:|..|.|.|..|:|:||..|||.||:|:.||.|..
Zfish   140 KGNLKDHTRIHSGERRFGCQQCGKRFTHKANLTDHSRIHTGEKPFACAQCGKSFTHATSLKTHRL 204

  Fly   292 THTGEKPHICQLCNKSFARIHNLVAHLQTQQHI-NDPRLTAYLSTF 336
            :||||:...|:.|.:.|.    |.|||:....| :|.|  .|:.:|
Zfish   205 SHTGERAFSCEQCGQKFL----LSAHLKRHLKIHSDER--PYVCSF 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 31/76 (41%)
COG5048 210..>345 CDD:227381 50/128 (39%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 10/19 (53%)
zf-H2C2_2 286..310 CDD:290200 10/23 (43%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
LOC100332787XP_002660733.3 COG5048 <77..314 CDD:227381 68/199 (34%)
C2H2 Zn finger 102..122 CDD:275368 7/19 (37%)
zf-H2C2_2 114..139 CDD:290200 11/24 (46%)
C2H2 Zn finger 130..150 CDD:275368 9/19 (47%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
zf-H2C2_2 170..195 CDD:290200 12/24 (50%)
C2H2 Zn finger 186..206 CDD:275368 10/19 (53%)
C2H2 Zn finger 214..234 CDD:275368 7/23 (30%)
zf-H2C2_2 226..249 CDD:290200 7/21 (33%)
C2H2 Zn finger 242..262 CDD:275368 1/3 (33%)
C2H2 Zn finger 270..290 CDD:275368
zf-H2C2_2 282..306 CDD:290200
C2H2 Zn finger 298..318 CDD:275368
zf-H2C2_2 310..335 CDD:290200
C2H2 Zn finger 326..344 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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