DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and znf982

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_017207343.2 Gene:znf982 / 100331424 ZFINID:ZDB-GENE-131120-1 Length:600 Species:Danio rerio


Alignment Length:182 Identity:66/182 - (36%)
Similarity:84/182 - (46%) Gaps:36/182 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 KLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSF----HVNY----------------- 228
            |.|.|..||..:.|.|.|..|:|.|..|:||.|.:|.|||    |::.                 
Zfish   401 KTHKCDHCGKTFLRPSELKKHLRVHTKEKPYSCSVCEKSFTQQSHLSQHQKIHTGVREYMCFACD 465

  Fly   229 -------QLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVL 286
                   .||:|.|.|||.||:.|..|.::|.....|..|||.|..|:||||..|.|.|...|.|
Zfish   466 KTYITAGDLKKHQRIHTGEKPFVCSDCNKSFRHSGHLTAHERIHTGEKPYACTQCEKTFRRPSNL 530

  Fly   287 KMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQ--------HINDPRLT 330
            ..|...||||:||.|:.|.::|.|:..|..||:...        ||:|..||
Zfish   531 NEHMMIHTGERPHKCEQCFQTFLRLAELKKHLRVHAKEKPQGVLHIDDVYLT 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
DUF45 <204..281 CDD:302795 36/104 (35%)
COG5048 210..>345 CDD:227381 55/157 (35%)
C2H2 Zn finger 217..237 CDD:275368 10/47 (21%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 13/24 (54%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 11/23 (48%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
znf982XP_017207343.2 C2H2 Zn finger 180..200 CDD:275368
COG5048 204..537 CDD:227381 48/135 (36%)
C2H2 Zn finger 208..228 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 264..284 CDD:275368
C2H2 Zn finger 293..313 CDD:275368
C2H2 Zn finger 321..341 CDD:275368
C2H2 Zn finger 349..369 CDD:275368
C2H2 Zn finger 377..397 CDD:275368
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..481 CDD:275368 4/19 (21%)
C2H2 Zn finger 489..509 CDD:275368 7/19 (37%)
C2H2 Zn finger 517..537 CDD:275368 7/19 (37%)
zf-H2C2_2 529..554 CDD:316026 11/24 (46%)
C2H2 Zn finger 545..565 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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